Gene Information

Name : gspG (ECED1_3993)
Accession : YP_002399825.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Virulence
Product : pseudopilin, cryptic, general secretion pathway
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 3902410 - 3902847 bp
Length : 438 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 95204361, 96256608; Product type t : transporter

DNA sequence : 
ATGCGCGCAACGGATAAGCAACGCGGTTTTACATTACTGGAAATTATGGTGGTAATTGTCATCATTGGCGTACTCGCCAG
CCTGGTGGTTCCCAACCTGATGGGCAATAAAGAAAAGGCGGATAAACAAAAAGCCGTCAGCGATATTGTGGCGCTGGAAA
ACGCCCTAGATATGTACAAGCTCGACAATCATCGCTATCCAACCACAAATCAGGGGCTTGAATCCTTAGTAGAAGCGCCG
ACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCGATCCCTGGGACAATGATTA
TGTCCTCGTTAATCCTGGTGAACATGGTGCATACGATCTGCTTTCAGCAGGACCCGATGGTGAAATGGAAACCGAGGACG
ACATCACCAACTGGGGTTTGAGCAAAAAGAAAAAGTAA

Protein sequence : 
MRATDKQRGFTLLEIMVVIVIIGVLASLVVPNLMGNKEKADKQKAVSDIVALENALDMYKLDNHRYPTTNQGLESLVEAP
TLPPLAANYNKEGYIKRLPADPWDNDYVLVNPGEHGAYDLLSAGPDGEMETEDDITNWGLSKKKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 1e-38 65
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-38 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG YP_002399825.1 pseudopilin, cryptic, general secretion pathway VFG2050 Protein 3e-39 64
gspG YP_002399825.1 pseudopilin, cryptic, general secretion pathway VFG0180 Protein 3e-30 53
gspG YP_002399825.1 pseudopilin, cryptic, general secretion pathway VFG1871 Protein 1e-29 50