Gene Information

Name : ECED1_3608 (ECED1_3608)
Accession : YP_002399463.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 3530408 - 3530971 bp
Length : 564 bp
Strand : -
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
GTGCCTGAACGCGGATTCACACTTCTGGAAATCATGCTGGTGATTTTCCTTATCGGCCTTGCCAGTGCGGGCGTGGTACA
GACGTTTGCGACCGCTTCAGAGCCGCCTGCGAAAAAAGCGGCGCAGGATTTTCTGACTCGCTTTGCGCAGTTTAAGGACA
GGGCAGTGATCGAAGGGCAAACACTCGGCGTGCTAATCGACCCGCCAGGTTACCAGTTTATGCAGCGTCGTCACGGGCAA
TGGTTGCCCGTTTCTGCGACCCGGTTATCGGCACAGGTTACGGTGCCGAAACAGGTGCAGATGCTGTTACAACCCGGCAG
TGATATCTGGCAGAAGGAGTATGCGCTGGAGCTGCAGCGTCGTCGCCTGACGCTGCACGATATTGAACTGGAGCTGCAAA
AAGAGGCGAAAAAGAAGACACCGCAGATCCGTTTTTCGCCTTTTGAACCTGTCACGCCGTTTACACTGCGTTTTTACTCG
TCGGCACAAAACGCGTGTTGGGCGGTAAAGCTGGTGCACGATGGCGCGTTATCCCTCAATCAATGTGATGAGGGGATGCC
ATGA

Protein sequence :
MPERGFTLLEIMLVIFLIGLASAGVVQTFATASEPPAKKAAQDFLTRFAQFKDRAVIEGQTLGVLIDPPGYQFMQRRHGQ
WLPVSATRLSAQVTVPKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPVTPFTLRFYS
SAQNACWAVKLVHDGALSLNQCDEGMP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspH YP_854403.1 type II secretion protein GspH Not tested PAI I APEC-O1 Protein 3e-84 98
gspH CAE85230.1 GspH, hypothetical type II secretion protein Not tested PAI V 536 Protein 9e-78 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECED1_3608 YP_002399463.1 hypothetical protein VFG2051 Protein 5e-78 96