Gene Information

Name : ECED1_3606 (ECED1_3606)
Accession : YP_002399461.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4795
EC number : -
Position : 3529438 - 3530043 bp
Length : 606 bp
Strand : -
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
GTGAGAAGGGCTCGCGCTGGTTTCACGTTACTGGAAATGCTGGTGGCAATAGCCATTTTTGCCTCACTGGCACTGATGGC
GCAGCAGGTGACAAACGGCGTTACACGCGTGAATAGCGCCGTCGCCGGACACGATCAAAAACTAAACCTCATGCAGCAAA
CGATGAGTTTTTTGAACCACGATCTGACACAAATGATGCCGCGTCCGGTAAGAGGCGATCAGGGCCAGCGTGAACCAGCG
TTACTGGCGGGCGCTGGCGTGCTGGCGTCTGAGAGTGAAGGGATGCGTTTTGTACGTGGCGGCGTGGTTAATCCGTTGAT
GCGTCTGCCGCGCAGTAATCTGCTCACCGTCGGTTACCGCATTCATGGTGGTTATCTCGAACGGTTAGCCTGGCCACTGA
CCGATGCGGCAGGCAGCGTGAAGCCAACAACGCAAAAATTAATCCCGGCGGATTCGCTCCGTTTGCAGTTCTACGACGGC
ACGCGCTGGCAGGCGAGTTGGTCATCAGTGCAGGCGATTCCTGTGGCAGTACGCATAACCCTGCATTCGCCACAATGGGG
CGAAATTGAACGCATCTGGTTGTTACGCGGGCCGCAATTATCATGA

Protein sequence :
MRRARAGFTLLEMLVAIAIFASLALMAQQVTNGVTRVNSAVAGHDQKLNLMQQTMSFLNHDLTQMMPRPVRGDQGQREPA
LLAGAGVLASESEGMRFVRGGVVNPLMRLPRSNLLTVGYRIHGGYLERLAWPLTDAAGSVKPTTQKLIPADSLRLQFYDG
TRWQASWSSVQAIPVAVRITLHSPQWGEIERIWLLRGPQLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspJ CAE85228.1 GspJ, hypothetical type II secretion protein Not tested PAI V 536 Protein 5e-85 99
gspJ YP_854401.1 type II secretion protein GspJ Not tested PAI I APEC-O1 Protein 2e-89 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECED1_3606 YP_002399461.1 hypothetical protein VFG2053 Protein 9e-84 97