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Name : ECED1_3605 (ECED1_3605) Accession : YP_002399460.1 Strain : Escherichia coli ED1a Genome accession: NC_011745 Putative virulence/resistance : Virulence Product : GspK-like type II secretion protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3156 EC number : - Position : 3528464 - 3529441 bp Length : 978 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter DNA sequence : ATGATCACCTCACCACCAAAACGCGGAATGGCACTGGTCGTGGTGCTGGTATTGCTGGCGGTCATAATGCTGGTAACCAT CACGCTTTCCAGTCGGATGCAGCAACAACTTGGGCGAACGCGCAGCCAGCAGGAGTACCAGCAGGCGCTGTGGTACAGCG CCAGTGCAGAAAGCCTGGCGCTGAGCGCGCTCAGTCTGAGCCTGAAAAATGAAAAGCGTGTGCATCTGGCACAGCCGTGG GCTTCTGGCCCGCGTTTTTTCCCACTGCCGCAGGGGCAAATTGCCGTCACTCTGCGTGACGCACAGGCCTGCTTTAACCT GAATGCCCTCGCTCAGCCGACGACGGCGTCGCGTCCGCTCGCGGTACAACAACTGATTGCCCTGATCTCGCGCCTCGATG TGCCTGCTTATCGGGCCGAACTGATAGCCGAAAGCCTGTGGGAGTTTATTGACGAAGACCGCAGCGTGCAGACGCGTCTG GGTCGTGAAGACAGCGAGTATCTCGCCCGCTCGGTGCCGTTCTACGCCGCTAATCAACCGCTGGCTGATATCAGCGAGAT GCGCGTGGTGCAGGGAATGGACGCCGGGCTTTATCAAAAACTGAAACCGTTGGTCTGTGCGCTGCCGATGGCCCGCCAGC AAATCAACATCAATACATTAGATGTCACGCAAAGTGTGATTCTTGAGGCGCTGTTTGACCCGTGGTTAAGCCCTGTTCAG GCGCGGGCATTATTACAACAACGTCCGGCGAAGGGCTGGGAAGATGTCGATCAGTTTCTTGCTCAGCCGCTACTTGCAGA CGTCGATGAGCGTACTAAAAAACAGCTAAAAACCATCCTGAGCGTGGACAGCAATTACTTCTGGCTGCGTTCAGATATCA CCGTGAATGAGATTGAACTGACGATGAATTCGTTAATTGTCCGCATGGGCCCACAACACTTTTCTGTTCTCTGGCATCAG ACAGGAGAAAGTGAGTGA Protein sequence : MITSPPKRGMALVVVLVLLAVIMLVTITLSSRMQQQLGRTRSQQEYQQALWYSASAESLALSALSLSLKNEKRVHLAQPW ASGPRFFPLPQGQIAVTLRDAQACFNLNALAQPTTASRPLAVQQLIALISRLDVPAYRAELIAESLWEFIDEDRSVQTRL GREDSEYLARSVPFYAANQPLADISEMRVVQGMDAGLYQKLKPLVCALPMARQQININTLDVTQSVILEALFDPWLSPVQ ARALLQQRPAKGWEDVDQFLAQPLLADVDERTKKQLKTILSVDSNYFWLRSDITVNEIELTMNSLIVRMGPQHFSVLWHQ TGESE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspK | YP_854400.1 | type II secretion protein GspK | Not tested | PAI I APEC-O1 | Protein | 2e-124 | 99 |
| gspK | CAE85227.1 | GspK, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-123 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECED1_3605 | YP_002399460.1 | GspK-like type II secretion protein | VFG2054 | Protein | 1e-123 | 98 |
