Gene Information

Name : kpsT (ECED1_3601)
Accession : YP_002399456.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Virulence
Product : Polysialic acid transport ATP-binding protein kpsT
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : 3.6.3.38
Position : 3524137 - 3524805 bp
Length : 669 bp
Strand : -
Note : Evidence 1b : Function experimentally demonstrated in the studied species; PubMedId : 1856162, 8051103, 2082146; Product type t : transporter

DNA sequence : 
ATGATTAAGATTGAAAATTTGACGAAGTCATATCGCACGCCAGCGGGTCGACATTATGTCTTTAAGGATTTAAATATTGA
AATCCCTTCAGGAAAAAGTGTTGCCTTTATTGGTCGCAACGGAGCGGGTAAATCAACGTTACTGAGAATGATTGGCGGCA
TTGACCGCCCCGACAGTGGAAAGATCATCACTAATAAAACAATATCATGGCCAGTCGGCCTCGCAGGTGGATTTCAGGGA
AGTTTAACCGGACGCGAAAACGTAAAATTTGTTGCGCGGTTATACGCGAAGCAAGAAGAGCTGAAAGAGAAAATTGAGTT
TGTCGAAGAATTTGCCGAACTCGGTAAGTACTTCGATATGCCGATTAAAACTTACTCATCTGGTATGCGATCGCGTTTAG
GCTTTGGTTTAAGCATGGCATTTAAGTTTGATTATTATATCGTCGATGAAGTAACTGCAGTCGGTGATGCCAGGTTTAAA
GAAAAATGCGCTCAATTGTTTAAAGAAAGGCATAAAGAATCTAGTTTTTTAATGGTTTCACATAGTTTGAATTCATTGAA
AGAGTTTTGTGATGTGGCGATTGTGTTTAAGGATGACAATGCGGTTAGTTTTCATGAGGATGTTCAGGAGGGGGTAGATG
AGTATCGGAATTTATTGCTCACAAGTTAG

Protein sequence : 
MIKIENLTKSYRTPAGRHYVFKDLNIEIPSGKSVAFIGRNGAGKSTLLRMIGGIDRPDSGKIITNKTISWPVGLAGGFQG
SLTGRENVKFVARLYAKQEELKEKIEFVEEFAELGKYFDMPIKTYSSGMRSRLGFGLSMAFKFDYYIVDEVTAVGDARFK
EKCAQLFKERHKESSFLMVSHSLNSLKEFCDVAIVFKDDNAVSFHEDVQEGVDEYRNLLLTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 1e-73 75
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 3e-69 71
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 4e-42 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kpsT YP_002399456.1 Polysialic acid transport ATP-binding protein kpsT VFG1449 Protein 9e-70 71
kpsT YP_002399456.1 Polysialic acid transport ATP-binding protein kpsT VFG0696 Protein 9e-44 46
kpsT YP_002399456.1 Polysialic acid transport ATP-binding protein kpsT VFG0258 Protein 2e-42 43
kpsT YP_002399456.1 Polysialic acid transport ATP-binding protein kpsT VFG2563 Protein 2e-39 41