Gene Information

Name : kpsF (ECED1_3593)
Accession : YP_002399448.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Virulence
Product : Polysialic acid capsule expression protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : 5.3.1.13
Position : 3511600 - 3512619 bp
Length : 1020 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 8253690; Product type e : enzyme

DNA sequence :
GTGACTGTGGCATTATTTCCGTGCAAAGGAGCTGATATGTCTGAAAGACATTTACCTGATGACCAGAGCAGTACTATCGA
TCCATATCTAATTACCTCTGTTCGCCAGACTCTGGCAGAACAAGGCGCAGCATTACAAAACTTGTCTAAACAACTGGATT
CCGGGCAGTACCAGCGTGTCCTTAATTTGATAATGAACTGTAAAGGGCACGTTATTCTTTCGGGAATGGGTAAATCAGGG
CATGTCGGTCGTAAAATGTCAGCGACGCTGGCCTCTACGGGTACGCCTAGTTTCTTTATTCATCCTGCAGAAGCTTTCCA
TGGCGATCTGGGCATGATTACGCCTTACGATCTTCTGATCCTTATTTCTGCCAGCGGTGAAACGGATGAAATCCTCAAGC
TAGTTCCTTCACTGAAAAATTTCGGCAACCGAATTATCGCCATTACCAATAATGGAAATTCCACGCTGGCGAAAAATGCT
GATGCCGTGCTGGAACTCCACATGGCGAATGAAACCTGCCCGAATAATCTTGCACCAACAACGTCTACCACGCTGACGAT
GGCGATCGGCGATGCGCTGGCGATTGCCATGATCCACCAACGCAAATTTATGCCGAATGATTTTGCGCGCTATCACCCGG
GCGGTTCATTAGGTCGTCGCCTGCTGACCCGCGTTGCTGATGTCATGCTGCATGATGTTCCTGCGGTACAGCTGGATGCG
TCATTTAAAACCGTGATTCAACGTATCACCAGCGGATGCCAGGGAATGGTGATGGTAGAAGACGCAGAAGGTGGGCTAGC
GGGCATTATCACCGACGGTGACCTGCGTCGCTTTATGGAAAAAGAGGATTCTCTGACATCCGCCACGGCTGCGCAGATGA
TGACACGTGAACCGCTGACGCTACCGGAAGACACCATGATCATTGAAGCGGAAGAAAAAATGCAAAAACACCGCGTCTCA
ACGTTATTGGTGACCAACAAGGCAAATAAAGTCACTGGCCTTGTGCGCATTTTCGACTAA

Protein sequence :
MTVALFPCKGADMSERHLPDDQSSTIDPYLITSVRQTLAEQGAALQNLSKQLDSGQYQRVLNLIMNCKGHVILSGMGKSG
HVGRKMSATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAITNNGNSTLAKNA
DAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPNDFARYHPGGSLGRRLLTRVADVMLHDVPAVQLDA
SFKTVIQRITSGCQGMVMVEDAEGGLAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVS
TLLVTNKANKVTGLVRIFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 1e-159 99
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 2e-153 99
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 4e-154 99