Gene Information

Name : ECED1_3564 (ECED1_3564)
Accession : YP_002399423.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3491117 - 3492595 bp
Length : 1479 bp
Strand : -
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
ATGCAGATTAAGTCCAACGCGCTGGTGAAATTTGTGGTGCCCGCTGTTGTTCTGGTGGGGCTTGCAGTCACGATGAAAAG
CTGCAAAACGCAGGAAAATGTTGCTGACCGCGGGGAGCAGGCCCGGACCTTATCCGGATTATCGTCAGAAGAGCTACGGG
CTCTTGGGGTGGAAGGTGACACGCCGGAAGACACATTACGGACGCTGGTCGCCCGTATGAACCAGGTGCGGGACAATCAG
AGAACGCTGGAGAAACAGAACTCGCAACTTCTTAAGGATAACGAGCAGCTGCGCAGGCGGAGCACGGATGTGTCCGGTCA
GGTGAATGACGCTGTGGCAGGGGTGCAGAAAACCTACGAACAGAAGCAGCGGAAACTGCAGGAGCAGCAGCATTCCCTGA
TGTCGCAGATTGACGCCATGAAAGATCAACTGAGCCGGGCAGAGACGCTCAGTCGCCGCCAGGAAAGCGATATCCCGCCG
GGGCTCGGGCTTGATGCGGGCGGCGGCAGTGGCGTGGTGATTACGCAGGGGGCTGACGGGCTGATGTGGGTAAGTCCGGC
CGATCAGTCTCAGGATGATCCCCTGAGCAGCAGTGGTTCAAAGGGAGGCCCTCGTTTTCCGACCTCATTCCTTGAGGACA
ACGCACTGAGTCGTCAGAAGGCTGAGTATGAGCAGCAGGTGAAGGGATACAGCAATGAACAGCAGCGAGCCACCACACAG
GCGGTCTACACGCTGCCGGAAAATTCAACGCTGACAGGCAGTCGTGCGATGACGGCCCTGCTGGGGCGGGTGCCGATCAA
CGGCACCGTGACGGACCCTTACCCGTTCAAGATCCTGGTCGGGCGTGACAACCTCACGGCAAACGGCATTGAGCTGCCGG
ATGTGGAAGGGGCGATTGTCTCCGGCACGGCCAGTGGTGACTGGACGCTTTCCTGTGTGCGCGGGCAGGTGAACAGTATC
ACCTTTGTTTTTGCTGATGGCACGGTGCGCACGCTGCCGTCACCGGATGTCAACGGCACCACCAACAGCAATCAGCAGGC
GAAGGGGAATGGTACTGGCGGGATTGGCTGGATCTCCGATGAAGACGGTATTCCCTGCATCAGCGGTACCCGTAAATCCA
ATGCGTCAAGTTATCTGCCAACGATATTTGCACTGTCAGCCGCCGGTGCAGCCGGGGATGCCCTGAGTGAGGGGCAGTAT
ACCTCGCAGAACAATGTCAACGGTATCACCTCCACGCTGACCGGCAGCGCGGGGCAGGCTGCACTTGGTAAGGCGCTGTC
CGGTGGAATGAATGAGACGGCAGACTGGGTGAGGCAGCGTTACGGGCAGACGTTTGATGCCATTTATGTTCCTCCGGGGA
AAGCGCTGGCGGTACATATTACCCGACAACTGGCTATTGATTATGAAGAGCAAGGCCGCCGTGTGCGTTATGACTTCGCC
CTGCCGGGTGAAGCAAACGACCACGGGGGGCTTGACTGA

Protein sequence :
MQIKSNALVKFVVPAVVLVGLAVTMKSCKTQENVADRGEQARTLSGLSSEELRALGVEGDTPEDTLRTLVARMNQVRDNQ
RTLEKQNSQLLKDNEQLRRRSTDVSGQVNDAVAGVQKTYEQKQRKLQEQQHSLMSQIDAMKDQLSRAETLSRRQESDIPP
GLGLDAGGGSGVVITQGADGLMWVSPADQSQDDPLSSSGSKGGPRFPTSFLEDNALSRQKAEYEQQVKGYSNEQQRATTQ
AVYTLPENSTLTGSRAMTALLGRVPINGTVTDPYPFKILVGRDNLTANGIELPDVEGAIVSGTASGDWTLSCVRGQVNSI
TFVFADGTVRTLPSPDVNGTTNSNQQAKGNGTGGIGWISDEDGIPCISGTRKSNASSYLPTIFALSAAGAAGDALSEGQY
TSQNNVNGITSTLTGSAGQAALGKALSGGMNETADWVRQRYGQTFDAIYVPPGKALAVHITRQLAIDYEEQGRRVRYDFA
LPGEANDHGGLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2579 YP_002152298.1 hypothetical protein Not tested Not named Protein 2e-113 54
YE3484 YP_001007643.1 hypothetical protein Not tested YAPI Protein 2e-98 50
STY4570 NP_458655.1 putative exported protein Not tested SPI-7 Protein 4e-108 50
t4268 NP_807865.1 hypothetical protein Not tested SPI-7 Protein 1e-108 50
YpsIP31758_3707 YP_001402661.1 hypothetical protein Not tested YAPI Protein 6e-98 50
api37 CAF28511.1 putative exported protein Not tested YAPI Protein 1e-98 49
ORF C49 AAN62143.1 hypothetical protein Not tested PAGI-2(C) Protein 5e-71 44
ORF SG59 AAN62281.1 hypothetical protein Not tested PAGI-3(SG) Protein 6e-71 43
pph82 CAI36123.1 hypothetical protein Not tested PPHGI-1 Protein 7e-74 42
RL024 AAP84151.1 conserved hypothetical protein Not tested PAPI-1 Protein 3e-72 41
unnamed ABR13364.1 hypothetical protein Not tested PAGI-5 Protein 6e-73 41
EXA35 ABD94644.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-72 41