Gene Information

Name : ECED1_3563 (ECED1_3563)
Accession : YP_002399422.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Unknown
Product : putative lipoprotein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3490686 - 3491099 bp
Length : 414 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type lp : lipoprotein

DNA sequence :
GTGAGACGATTACGGTTAGTTATGTGTATCCCCCTGGCTGCCCTGCTGTTATCCGGGTGCTCCACCTCGAAAGAGGAGCT
TCTGCCGGCGGGCGATCAGACCATGCTTGAACTCTGGCAGGGGAAAACAACGGGGGGGAGCCAGCGACATGCGCAGGCCG
CCAGGGAGACACTGTGGCGGCCCCTGACGTCAGATGAGAAACAGCAGGTACACAAGGAGGGCCAGAGCTACAGCAGGACG
CAGGAAAGTGAAATCAGTCAGCAGTTTCCCCGTCTGCCAAACCCTGACATGGTGATGTACGTATTCCCGCATCTTGCCGG
CGGGACGTCACCGGTGCCGGGATACAGCACGATATTTCCTTTTTACAGCAGAACGCAGTATGCGTTACCAGGTGAGCGTA
CGGAGGCGATGTAA

Protein sequence :
MRRLRLVMCIPLAALLLSGCSTSKEELLPAGDQTMLELWQGKTTGGSQRHAQAARETLWRPLTSDEKQQVHKEGQSYSRT
QESEISQQFPRLPNPDMVMYVFPHLAGGTSPVPGYSTIFPFYSRTQYALPGERTEAM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4571 NP_458656.1 putative lipoprotein Not tested SPI-7 Protein 4e-37 63
t4267 NP_807866.1 lipoprotein Not tested SPI-7 Protein 4e-37 63
ORF SG58 AAN62280.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-29 55
PMI2577 YP_002152296.1 lipoprotein Not tested Not named Protein 7e-35 53
EXA34 ABD94643.1 conserved hypothetical protein Not tested ExoU island A Protein 5e-31 53
RL023 AAP84150.1 conserved hypothetical protein Not tested PAPI-1 Protein 5e-31 52
unnamed ABR13363.1 hypothetical protein Not tested PAGI-5 Protein 7e-26 51
ORF C48 AAN62142.1 hypothetical protein Not tested PAGI-2(C) Protein 4e-27 51
pph83 CAI36124.1 signal recognition particle GTPase Not tested PPHGI-1 Protein 3e-30 50
YpsIP31758_3706 YP_001402660.1 lipoprotein Not tested YAPI Protein 3e-29 49
api38 CAF28512.1 putative lipoprotein Not tested YAPI Protein 1e-29 49
YE3483 YP_001007642.1 putative lipoprotein Not tested YAPI Protein 6e-28 49
Pmu_03080 YP_005176207.1 conjugative transfer region lipoprotein Not tested ICEPmu1 Protein 4e-25 44