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Name : traF (ECED1_3520) Accession : YP_002399382.1 Strain : Escherichia coli ED1a Genome accession: NC_011745 Putative virulence/resistance : Unknown Product : putative plasmid transfer protein Function : - COG functional category : - COG ID : - EC number : - Position : 3446437 - 3447687 bp Length : 1251 bp Strand : + Note : Evidence 4 : Homologs of previously reported genes of unknown function DNA sequence : GTGCCACGCCTTTGCTATACCCGAAAGACCTTAATACAGGAAACTGAAATGATGATGAAAAAGCATATTACCCGTACACT TGTCGCGTCTGCCGTTTTATTTTCCTTTAATTCAGCGGCCGCCACCTCATATTCTGAAGCCCGTAATGATGCAATGGGCG GAACCGGCGTCGCCTCCTCTCACTATGGCGTGGCACCGCTGGCAAACCCGGCGCTGCTGACAAAAGCCGGTCCTGACGAT GATTTCAGCCTTCTGCTTCCGTCCGTCGGTGCGCAACTCTCCGACCCGGATAATATCACCGACAACGCCGACCGGATCAG TGATGACTGGAAGGCCTTCGACCGCGCCATCGACAGTAACCACGGTGTTCCTGAGGCTGCCGCACGCCTGAAAGAACGCC TCCGGGACTTCCGTCACACACATGCCGCCGCACAGTTGGGCGTTTCTGCTGTGGCGGCCCTTCCCGGTGACCGCCTCTCT GCCGCACTGATGGTTAAATCACACGGCACCGTCAGTGTCGACGGTAAAGTCTCTGATGCTGACCTCACTTACCTGGAAGA GGTGGCAAACAGCACCGGACAGGAGGTGGACAAAAGCCGCCTGACATCACAGGCCTTTGCCCGCGCGGCACTGATCACTG ATGTGGGTATTGCTCTGGCTACGGAACTGGAAACGGCCGGGCAGAAATGGTCTCTGGGCTTCACCCCCAAATTCCAGCGC GTCGACCTGTTCAACTACAACGTGCTGGTCAGAAATTATGACAGCAGCGCCTTCAAAGGCGACCGCTACCACAACACGAA AAATGGCATCAACGCCGACATCGGTGCCAGTACGGACCTGGATGACAACTGGACGCTGGGGCTGGTCGCACAGAACCTGA TCCCCCGTAGTATTGAGACAAAAGAAGTGAACGGTATCACGGAAACCTTCAGGATCCGCCCGCAGGTGACGGCCGGTGTC TCCTGGCACAACGCGATGTTCACCACCGCATTTGATGTGGATCTGACCCCGGCCAGCGGTTTCACCTCCGACAGCAACCG TCAGTTTGCCGCCATTGGCGCAGAATTTAATGCCTGGAAATGGGCACAGCTGCGCGCCGGTTACCGTCAGAATCTGGCCG GTAACGACGGCAGTGCATTCACGGCCGGGGTGGGGATCTCACCGTTTGATGTGGTTCACCTTGATGTTGCAGGCCTGATC GGCACGGACAACACTTACGGTGCGGTCGCACAGTTCCAGTTCACCTTCTGA Protein sequence : MPRLCYTRKTLIQETEMMMKKHITRTLVASAVLFSFNSAAATSYSEARNDAMGGTGVASSHYGVAPLANPALLTKAGPDD DFSLLLPSVGAQLSDPDNITDNADRISDDWKAFDRAIDSNHGVPEAAARLKERLRDFRHTHAAAQLGVSAVAALPGDRLS AALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQAFARAALITDVGIALATELETAGQKWSLGFTPKFQR VDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDNWTLGLVAQNLIPRSIETKEVNGITETFRIRPQVTAGV SWHNAMFTTAFDVDLTPASGFTSDSNRQFAAIGAEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLI GTDNTYGAVAQFQFTF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK00459.1 | unknown | Not tested | SHI-1 | Protein | 2e-140 | 97 |
