Gene Information

Name : pilQ (ECED1_3507)
Accession : YP_002399370.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Virulence
Product : Type IV pilus (ATPase)
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 3437229 - 3438749 bp
Length : 1521 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; Product type pe : putative enzyme

DNA sequence : 
ATGCCAGAGACTATCGTACTGCCTCCTGAAGATATTCGTGATTTCGTCGCAATTCAGCATGACGCTGACGGAAAAATCAG
GGTGAAAGTCGTCGAGGCGAAGAAGCACATCACCTCTGTACAACGTTACCTGACGCTCTTACGCTCCCGCTATCCGGGAA
AAATCAGCAAATTCGATTTTACCACTCTTGACGTTATCGCAACCCTGAACAGCAATAATACGGAACGTGCACCAGGCGTT
TTATCCGACGGAGGGATCAACACAGTACAAAGAAAAGTTCTTGATTACATCAGAAAAGCCGCTCAACTGGATGCCTCAGA
TCTGCATATCACACCAGGACGCGACAACACGGACTTCACCTATGTGGAAGCCCGGGTTCACGGCGAACTGGAAGTGCTCG
ATATCCTCCGGAAAGAAGAAGGTCTCGAATTACTGGGGGCCACCTATTCCGGCATGACCGACGTCATCAAGGGCACACAG
TTTGATCCCGGGGTGCCTCAGGATGCGCGTCTTTCAGAGCAGTACCTGAAACTGGCCGGTCTGTTTGGTGCACGCTACTC
CCACTATCCCTGCGTGGGCGGCCTCTATGCTGTGCTCCGTCTGATCAAGGATGACAGTCTGCAAATCCCGACCTTCAGCA
TGCTGGGCTATCACCCTGACCAGGAGCTCACCCTGCGCCGTATTCTGCAGCGCCCTGAAGGTATTATCACGCTCTCAGGA
CCAACAGGTTCAGGAAAATCCACCACGCTGAGAACCGCCTCTGCGGCATACCTTGAACAGTACGGCTTCAACAATACCGG
CGGTATTCTTCTGCCCCGTCGCAGGCTGTTCACCATTGAATCCCCGCCAGAGGGCCGTATACCCGGTGCCATTCAGACTG
CCGTCATGGATTCCGCACAGGGCTGGGTGGACTCCATTAAATCAGCACTGCGTCTTGACCCTGACGGGATCCTGAACGGC
GAAATCCGTGACCACGATTCCGCCATTACGGCAATAAAAGCCGCCATGACCGGGCATCTGATGCTGACCACCATCCATGC
GAACGACCCGATTAACATTCTCGAACGTCTTGAGATGGAGGGGGTACAGGCAAGGATGATTGCCGATCCGCAGCTGTTCA
TTGGCCTGCTGAGCCAGCGTCTGGTTCAGCTGATATGTCCGCACTGCCGTCGCCCCTGGCATGAGGTGGCCACCGACCGC
ACGGATGATGAACGGCGCCTGGTGGAAAGCGTCTGTAACCCGGACCAGGTATATCTGAGAAACCATGAAGGCTGCCCGCA
CTGCTGGCGTGGCGTGACGGGGCGAACGGTGATCGCAGAAGTTATCTCCCCGGATGCGCGTTTTTTCCAGCTGTACCGGG
AAAAGGGGCGTATCGAGGCCAGAACCTACTGGCACCGGGAACTGGGCGGAATGACCCGTAATCAGCATCTGCTGGGAAAA
ATCAACAGCGGACAGGTTGATCCGCTGGCGGCCCATTACATCTCTCCCGTCGATGAGGACAGCTATACGCTGCTGCACTG
A

Protein sequence : 
MPETIVLPPEDIRDFVAIQHDADGKIRVKVVEAKKHITSVQRYLTLLRSRYPGKISKFDFTTLDVIATLNSNNTERAPGV
LSDGGINTVQRKVLDYIRKAAQLDASDLHITPGRDNTDFTYVEARVHGELEVLDILRKEEGLELLGATYSGMTDVIKGTQ
FDPGVPQDARLSEQYLKLAGLFGARYSHYPCVGGLYAVLRLIKDDSLQIPTFSMLGYHPDQELTLRRILQRPEGIITLSG
PTGSGKSTTLRTASAAYLEQYGFNNTGGILLPRRRLFTIESPPEGRIPGAIQTAVMDSAQGWVDSIKSALRLDPDGILNG
EIRDHDSAITAIKAAMTGHLMLTTIHANDPINILERLEMEGVQARMIADPQLFIGLLSQRLVQLICPHCRRPWHEVATDR
TDDERRLVESVCNPDQVYLRNHEGCPHCWRGVTGRTVIAEVISPDARFFQLYREKGRIEARTYWHRELGGMTRNQHLLGK
INSGQVDPLAAHYISPVDEDSYTLLH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pilQ NP_458633.1 nucleotide-binding protein Virulence SPI-7 Protein 5e-81 45
pilQ NP_807844.1 nucleotide-binding protein Virulence SPI-7 Protein 5e-81 45
pilQ AAF14817.2 PilQ Virulence SPI-7 Protein 4e-81 45
YpsIP31758_3731 YP_001402685.1 type IV secretion system protein Virulence YAPI Protein 3e-89 44
pilQ CAF28490.1 putative ATP binding protein Virulence YAPI Protein 6e-89 44
YE3502 YP_001007663.1 putative type IV pilus protein Virulence YAPI Protein 1e-85 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pilQ YP_002399370.1 Type IV pilus (ATPase) VFG2313 Protein 5e-86 43