Gene Information

Name : yeeS (ECED1_3489)
Accession : YP_002399354.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Virulence
Product : putative DNA repair protein; CP4-44 prophage
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2003
EC number : -
Position : 3423713 - 3424159 bp
Length : 447 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 11053371; Product type pf : putative factor

DNA sequence : 
ATGACAACCAGAGAGCGCAGTCTCATTCTGCGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGTGGCCTT
CACCTCCACCCGTGCGGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAGTTCCGGGTGCTGTATC
TGAACAACCAGAATCAGCTGATTGCCGGTGAAACCCTCTTCACCGGCACCATCAACCGCACGGAAGTCCATCCCCGTGAA
GTGATTAAACGCGCCCTGTATCACAATGCCGCTGCTGTGGTGCTGGCACACAATCACCCGTCCGGTGAAGTCACACCCAG
CAAGGCAGACCGCCTTATCACGGAACGTCTGGTACAGGCACTGGGCCTGGTGGATATCCGGGTGCCGGACCATCTGATAG
TCGGTGGCAGCCAGGTTTTCTCCTTTGCCGAACATGGTCTGCTTTAA

Protein sequence : 
MTTRERSLILRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPRE
VIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67345.1 intergenic-region protein Not tested PAI II CFT073 Protein 8e-58 100
unnamed CAD66203.1 hypothetical protein Not tested PAI III 536 Protein 8e-57 99
unnamed AAK00479.1 unknown Not tested SHI-1 Protein 1e-56 98
z1217 CAD33787.1 Z1217 protein Not tested PAI I 536 Protein 3e-56 98
yeeS AAZ04458.1 putative RadC-like protein Not tested PAI I APEC-O1 Protein 3e-55 98
yeeS YP_854323.1 radC-like protein YeeS Not tested PAI I APEC-O1 Protein 4e-55 98
unnamed CAD42098.1 hypothetical protein Not tested PAI II 536 Protein 1e-55 98
c5152 NP_757000.1 radC-like protein yeeS Not tested PAI II CFT073 Protein 4e-55 98
Z1217 NP_286752.1 RadC family DNA repair protein Not tested TAI Protein 1e-55 98
yeeS CAI43846.1 YeeS protein Not tested LEE Protein 2e-56 98
yeeS ADD91702.1 YeeS Not tested PAI-I AL862 Protein 2e-56 98
yeeS CAI43901.1 YeeS protein Not tested LEE Protein 5e-56 98
unnamed AAL08475.1 unknown Not tested SRL Protein 4e-56 98
yeeS NP_838484.1 RADC family DNA repair protein Not tested SHI-1 Protein 1e-56 98
aec73 AAW51756.1 Aec73 Not tested AGI-3 Protein 4e-56 98
yeeS NP_708770.1 RADC family DNA repair protein Not tested SHI-1 Protein 1e-56 98
yeeS CAE85201.1 YeeS protein Not tested PAI V 536 Protein 3e-56 98
Z1657 NP_287160.1 RadC family DNA repair protein Not tested TAI Protein 2e-54 96
ECO103_3589 YP_003223446.1 radC-like protein YeeS Not tested LEE Protein 1e-54 96
VC1786 NP_231421.1 DNA repair protein RadC Not tested VPI-2 Protein 6e-19 57
VC0395_A1383 YP_001217326.1 DNA repair protein RadC Not tested VPI-2 Protein 6e-19 57
VPI2_0034 ACA01849.1 DNA repair protein RadC Not tested VPI-2 Protein 3e-19 57
VC0510 NP_230161.1 DNA repair protein RadC-like protein Not tested VSP-2 Protein 5e-17 53
radC AAN62140.1 putative DNA repair protein RadC Not tested PAGI-2(C) Protein 6e-19 46
radC AAN62275.1 putative DNA repair protein RadC Not tested PAGI-3(SG) Protein 4e-19 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yeeS YP_002399354.1 putative DNA repair protein; CP4-44 prophage VFG1678 Protein 3e-57 99
yeeS YP_002399354.1 putative DNA repair protein; CP4-44 prophage VFG1617 Protein 5e-56 98
yeeS YP_002399354.1 putative DNA repair protein; CP4-44 prophage VFG1528 Protein 1e-56 98
yeeS YP_002399354.1 putative DNA repair protein; CP4-44 prophage VFG0660 Protein 4e-57 98
yeeS YP_002399354.1 putative DNA repair protein; CP4-44 prophage VFG1066 Protein 2e-56 98
yeeS YP_002399354.1 putative DNA repair protein; CP4-44 prophage VFG1119 Protein 2e-19 57