Gene Information

Name : ECED1_3488 (ECED1_3488)
Accession : YP_002399353.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Virulence
Product : putative antirestriction protein (klcA-like)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3423182 - 3423667 bp
Length : 486 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 7519596; Product type pf : putative factor

DNA sequence :
ATGACAACCGTCTCGCATAATTCCACCACTCCTTCTGTTTCCGTAACCGCTGCATCAGGGAATGACCAGCCTCAGTTGGT
TGCCACCATAGTCCCTGATGAACAGCGCATCAGCTTCTGGCCGCAGCATTTTGGCCTCATTCCACAGTGGGTGACCCTGG
AGCCCCGTGTCTTCGGCTGGATGGACCGTCTGTGTGAAGACTACTGCGGTGGTATCTGGAATCTGTACACCCTGAACAAC
GGTGGCGCATTTATGGCACCCGAACCGGATGACGATGATGACGAAACATGGGTGCTGTTTAACGTCATGAACGGTAACCG
CGCTGAAATGAGCCCGGAAGCCGCCGGCATTGCCGCCTGTCTGATGACGTACAGTCATCATGCCTGTCGTACGGAGTGTT
ATGCCATGACGGTCCATTATTACCGGCTGCGGGATTACGCCCTGCAGCATCCGGAATGCAGCGCCATTATGCGCATCATC
GACTGA

Protein sequence :
MTTVSHNSTTPSVSVTAASGNDQPQLVATIVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNN
GGAFMAPEPDDDDDETWVLFNVMNGNRAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRII
D

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 1e-62 98
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 2e-60 97
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 4e-61 97
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 4e-61 97
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 2e-59 96
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 3e-65 96
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 2e-65 96
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 2e-66 96
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 9e-58 96
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 9e-58 96
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 2e-64 95
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 7e-58 95
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 8e-64 93
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 1e-64 93
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-59 92
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-59 92
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-59 92

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECED1_3488 YP_002399353.1 putative antirestriction protein (klcA-like) VFG1677 Protein 1e-65 96
ECED1_3488 YP_002399353.1 putative antirestriction protein (klcA-like) VFG0659 Protein 3e-58 96
ECED1_3488 YP_002399353.1 putative antirestriction protein (klcA-like) VFG1527 Protein 6e-65 93
ECED1_3488 YP_002399353.1 putative antirestriction protein (klcA-like) VFG1616 Protein 3e-64 93