Gene Information

Name : ECED1_3487 (ECED1_3487)
Accession : YP_002399352.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3422272 - 3423090 bp
Length : 819 bp
Strand : +
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
ATGCGATTAGCCAGTCGTTTTGGTCATGTAAACCAGATACGCCGTGACCGTCCGCTGACACATGAAGAACTGATGCACTA
TGTACCCAGTATTTTTGGGGAAGATCGGCATACCTCCCGCAGTGAACGCTATGCGTACATTCCCACCATCACCGTACTGG
AAAGCCTGCAGCGGGAAGGTTTTCAGCCATTCTTCGCCTGCCAGACCCGCGTGCGCGACCCGGGCCGCCGGGGATACACC
AAACACATGCTGCGTCTGCGCCGTGACGGGGAGATAAACGGACAACATGTCCCTGAAATTATTCTGCTCAACTCTCATGA
CGGTACCTCCAGCTACCAGATGTTACCCGGATATTTTCGTGCCATCTGCACCAATGGCCTGGTCTGCGGTCAGTCGCTGG
GAGAAGTGCGTGTTCCGCACCGGGGAAATGTGGTGGACAGAGTCATTGAAGGGGCTTACGAGGTGGTGGGGGTTTTTGAC
CGGATTGAGGAAAAGCGTGATGCCATGCAGTCGCTGATTCTGCCGCCACCGGCACGCCAGGCGCTGGCACAGGCGGCGCT
GACTTACCGTTATGGTGACGAACATCAGCCCGTCACCACCGCCGACATTCTGACACCACGACGCCGGGAGGATTACGGTA
AGGACCTGTGGAGTGCTTATCAGACCATTCAGGAGAATATGCTGAAAGGCGGAATTTCCGGTCGCAGTGCCAGAGGGAAA
CGTATCCATACCCGTGCCATTCACAGCATCGACACCGACATTAAGCTCAATCGCGCATTGTGGGTGATGGCTGAAACGCT
GCTGGAGAGCATGTGCTGA

Protein sequence :
MRLASRFGHVNQIRRDRPLTHEELMHYVPSIFGEDRHTSRSERYAYIPTITVLESLQREGFQPFFACQTRVRDPGRRGYT
KHMLRLRRDGEINGQHVPEIILLNSHDGTSSYQMLPGYFRAICTNGLVCGQSLGEVRVPHRGNVVDRVIEGAYEVVGVFD
RIEEKRDAMQSLILPPPARQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSARGK
RIHTRAIHSIDTDIKLNRALWVMAETLLESMC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 2e-113 95
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 2e-113 95
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 2e-113 95
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 1e-114 95
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 2e-113 95
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 3e-113 94
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 2e-111 94
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 5e-113 94
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 3e-113 94
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 8e-114 93
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 7e-112 93
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-111 93
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 9e-112 93
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 3e-111 92
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 3e-111 92
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 4e-72 55
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 2e-71 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECED1_3487 YP_002399352.1 hypothetical protein VFG1526 Protein 7e-115 95
ECED1_3487 YP_002399352.1 hypothetical protein VFG1676 Protein 1e-111 94
ECED1_3487 YP_002399352.1 hypothetical protein VFG1615 Protein 3e-113 94
ECED1_3487 YP_002399352.1 hypothetical protein VFG0658 Protein 1e-111 92