Gene Information

Name : ECED1_3483 (ECED1_3483)
Accession : YP_002399349.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Virulence
Product : putative GTPase
Function : -
COG functional category : R : General function prediction only
COG ID : COG3596
EC number : -
Position : 3419351 - 3420235 bp
Length : 885 bp
Strand : +
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence : 
ATGCCATTCAGCAATTCTTCCCTCTCCGCGCAAGTGAAATCATATCTGACGTTTCTTCCTGAAGAAATACGCCAGAAAAT
CCTTGAACATCTCCACGGTGTTATTCATTACGAGCCCGTGATTGGCATTATGGGTAAATCCGGCACCGGCAAGAGCAGCC
TGTGTAATGCCATTTTTCAGTCCCGTATCTGCGCCACGCATCCCCTGAACGGCTGCACCCGCCAGGCTCATCGTCTTACC
CTGCAGCTCGGTGAACGCAGAATGACGCTGGTCGATCTGCCCGGCATTGGTGAAACACCGCAGCATGATCAGGAATACCG
AGCGCTTTATCGTCAGTTACTGCCGGAACTGGATCTGATTATCTGGATCCTGCGGAGTGATGAACGTGCGTATGCTGCCG
ATATTGCCATGCATCAGTTTTTACTGAATGAGGGCGCAGATCCCTCGCGCTTTCTGTTTGTTCTCAGCCATGCCGATCGC
ATGTTTCCTGCTGAAGAATGGAATGCCACAGAAAAATGCCCGTCCCGTCACCAGGAACTCTCACTGGCGACAGTAATAGC
CCGGGTGGCCACCCTGTTCCCTTCATCATTTCCGGTACTCCCTGTAGCCGCACCTGCAGGCTGGAACCTTCCAGCGCTGG
TGTCACTGATGATCCACGCGCTGCCACCACAGGCAACCAGCGCAGTTTATTCACATATCAGGGGGGAAAACCGCTCTGAA
CAGGCCCGGAAACACGCACAACAGACTTTTGGTGATGCCATCGGGAAAAGTTTTGACGACGCCGTTGCCCGGTTCAGTTT
TCCGGCCTGGATGTTACAGCTTCTGCGTAAAGCCCGGGACCGCATTATCCACCTGCTGATCACACTGTGGGAGCGTCTGT
TCTGA

Protein sequence : 
MPFSNSSLSAQVKSYLTFLPEEIRQKILEHLHGVIHYEPVIGIMGKSGTGKSSLCNAIFQSRICATHPLNGCTRQAHRLT
LQLGERRMTLVDLPGIGETPQHDQEYRALYRQLLPELDLIIWILRSDERAYAADIAMHQFLLNEGADPSRFLFVLSHADR
MFPAEEWNATEKCPSRHQELSLATVIARVATLFPSSFPVLPVAAPAGWNLPALVSLMIHALPPQATSAVYSHIRGENRSE
QARKHAQQTFGDAIGKSFDDAVARFSFPAWMLQLLRKARDRIIHLLITLWERLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42093.1 hypothetical protein Not tested PAI II 536 Protein 5e-136 99
ORF_43 AAZ04452.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-134 95
unnamed CAD33781.1 hypothetical protein Not tested PAI I 536 Protein 2e-134 95
APECO1_3493 YP_854318.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-134 95
c5162 NP_757010.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-134 95
unnamed AAL67395.1 unknown Not tested PAI II CFT073 Protein 2e-134 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECED1_3483 YP_002399349.1 putative GTPase VFG1612 Protein 3e-136 99
ECED1_3483 YP_002399349.1 putative GTPase VFG1522 Protein 1e-134 95