Gene Information

Name : ECED1_0320 (ECED1_0320)
Accession : YP_002396378.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Unknown
Product : putative transposase ORF 1, IS66 family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 336447 - 337853 bp
Length : 1407 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme

DNA sequence :
ATGAACGACATCTCTTCTGACGACATCCTCCTGCTGAAACAGCGCCTGGCCGAACAGGAAGCGCTGATCCACGCCCTGCA
GGAAAAGCTGAGCAACCGGGAGCGCGAAATAGACCATCTGCAGGCGCAGCTGGATAAACTCCGCCGGATGAACTTCGGCA
GTCGTTCCGAAAAAGTCTCCCGCCGTATCGCACAAATGGAAGCCGATCTGAACCGGCTTCAGAAAGAGAGCGATACGCTG
ACTGGTAGGGTGTATGACCCGGCAGTACAGCGTCCGTTGCGTCAGACCCGCCCCCGTAAGCCGTTCCCTGAATCACTACC
CCGTGACGAAAAGCGACTGTTGCCTGCAGCGCCGTGCTGCCCGAACTGCGGCGGTTCACTGAGCTATCTGGGCGAGGATA
CCGCCGAACAGCTGGAGTTGATGCGTAGCGCCTTCCGGGTTATCCGGACGGTACGGGAAAAACATGCCTGTACTCAGTGC
GATGCCATCGTGCAGGCACCTGCACCTTCGCGGCCCATCGAGCGGGGTATCGCCGGACCGGGGCTGCTGGCCCGCGTGTT
GACCTCGAAGTATGCAGAGCACACCCCGCTGTATCGCCAGTCAGAAATATACGGCCGGCAAGGTGTGGAGCTGAGTCGTT
CACTGCTGTCGGGCTGGGTGGATGCATGCTGCCGGCTACTGTCACCGCTGGAAGAAGCGCTTCAGGACTATGTGCTGACT
GACGGTAAGCTCCATGCTGATGACACGCCTGTCCCGGTGCTGTTGCCAGGCAATAAGAAAACGAAGACCGGGCGGTTATG
GACCTACGTTCGTGACGACCGTAACGCCGGGTCAACGCTGGCGCCGGCGGTGTGGTTCGCTTACAGCCCGGACAGAAAAG
GCATCCATCCGCAGACCCATCTTGCGGGGTTCAGTGGTGTACTGCAGGCGGATGCATACGCCGGGTTCAACGAGCTGTAC
CGGGATGGCCGGATAACGGAAGCCGCCTGTTGGGCTCACGCCCGCCGTAAAATCCACGATGTGCACGTTCGCACCCCGTC
AGCCCTGACGGAGGAAGCGCTGAAACGGATCGGCGAACTGTACGCCATCGAGGCAGAGATAAGGGGAATGACGGCGGAGC
AGCGCCTTGCCGAACGTCAGTTGAAAACGAAACCGCTGCTGAAATCCCTGGAAAGCTGGCTGCGTGAAAAGATGAAAACC
CTGTCGCGTCACTCGGATACGGCGAAAGCGTTCGCATACCTGCTGAAACAGTGGGAGGCCCTGAACGTGTACTGCAGCAA
TGGCTGGGTGGAAATCGACAACAACATCGCAGAGAACGCCTTACGGGGTGTGGCCGTGGGCCGGAAGAACTGGTTGTGTG
TGTCACGAAGGAGAACTGATAGCGGCAATATGAAAATTGCAGCATAA

Protein sequence :
MNDISSDDILLLKQRLAEQEALIHALQEKLSNREREIDHLQAQLDKLRRMNFGSRSEKVSRRIAQMEADLNRLQKESDTL
TGRVYDPAVQRPLRQTRPRKPFPESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRTVREKHACTQC
DAIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPLYRQSEIYGRQGVELSRSLLSGWVDACCRLLSPLEEALQDYVLT
DGKLHADDTPVPVLLPGNKKTKTGRLWTYVRDDRNAGSTLAPAVWFAYSPDRKGIHPQTHLAGFSGVLQADAYAGFNELY
RDGRITEAACWAHARRKIHDVHVRTPSALTEEALKRIGELYAIEAEIRGMTAEQRLAERQLKTKPLLKSLESWLREKMKT
LSRHSDTAKAFAYLLKQWEALNVYCSNGWVEIDNNIAENALRGVAVGRKNWLCVSRRRTDSGNMKIAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l0015 CAD33775.1 L0015 protein Not tested PAI I 536 Protein 3e-160 97
unnamed AAL08460.1 unknown Not tested SRL Protein 1e-177 95
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 0.0 93
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 0.0 93
unnamed AAC31494.1 L0015 Not tested LEE Protein 0.0 93
tnp AEA34686.1 transposase Not tested Not named Protein 0.0 93
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 0.0 93
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 0.0 93
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 0.0 93
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 0.0 93
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 0.0 93
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 1e-175 92
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 0.0 91
unnamed AAL57570.1 unknown Not tested LEE Protein 0.0 91
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 1e-120 68
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 1e-131 65
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 3e-122 63
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 7e-126 62
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 7e-126 62
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 2e-123 59
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 3e-123 59
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 1e-101 59
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 7e-114 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECED1_0320 YP_002396378.1 putative transposase ORF 1, IS66 family VFG1516 Protein 1e-160 97
ECED1_0320 YP_002396378.1 putative transposase ORF 1, IS66 family VFG1051 Protein 7e-178 95
ECED1_0320 YP_002396378.1 putative transposase ORF 1, IS66 family VFG0793 Protein 0.0 93
ECED1_0320 YP_002396378.1 putative transposase ORF 1, IS66 family VFG1513 Protein 7e-121 68
ECED1_0320 YP_002396378.1 putative transposase ORF 1, IS66 family VFG1736 Protein 3e-125 63