Gene Information

Name : ECED1_0319 (ECED1_0319)
Accession : YP_002396377.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Unknown
Product : putative transposase ORF2, IS66 family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 336050 - 336397 bp
Length : 348 bp
Strand : +
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
ATGATCCCGTTACCTTCCGGGACCAAAATTTGGCTGGTTGCCGGTATCACCGATATGAGAAATGGCTTCAACGGCCTGGC
TGCGAAAGTACAGACGGCGCTGGAAGACGATCCCATGTCCGGCCATGTTTTCATTTTCCGGGGCCGCAGCGGCAGTCAGG
GTAAACTGCTGTGGTCCACCGGTGACGGGCTGTGCCTCCTGACCAAACGGCTGGAGCGTGGGCGCTTCGCCTGGCCGTCA
GCCCGTGATGGCAAAGTGTTCCTTACGCAGGCGCAGCTGGCGATGCTGCTGGAAGGTATCGACTGGCGACAGCCTAAGCG
GCTGCTGACCTCCCTGACCATGCTGTAA

Protein sequence :
MIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTALEDDPMSGHVFIFRGRSGSQGKLLWSTGDGLCLLTKRLERGRFAWPS
ARDGKVFLTQAQLAMLLEGIDWRQPKRLLTSLTML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 6e-48 99
unnamed AAC31493.1 L0014 Not tested LEE Protein 4e-48 99
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 6e-48 99
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 4e-48 99
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 6e-48 99
unnamed AAL99258.1 unknown Not tested LEE Protein 4e-48 99
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 6e-48 99
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 4e-48 99
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 3e-47 98
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 3e-47 98
unnamed AAL08461.1 unknown Not tested SRL Protein 8e-48 97
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 4e-35 97
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-47 96
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 2e-47 96
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 4e-38 75
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 4e-38 75
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 9e-38 74
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 8e-36 70
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 8e-36 70
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 4e-29 69
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 8e-35 65
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 8e-35 65
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 7e-34 65
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 7e-34 65
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 1e-34 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECED1_0319 YP_002396377.1 putative transposase ORF2, IS66 family VFG1709 Protein 2e-48 99
ECED1_0319 YP_002396377.1 putative transposase ORF2, IS66 family VFG0792 Protein 2e-48 99
ECED1_0319 YP_002396377.1 putative transposase ORF2, IS66 family VFG1517 Protein 1e-35 97
ECED1_0319 YP_002396377.1 putative transposase ORF2, IS66 family VFG1052 Protein 3e-48 97
ECED1_0319 YP_002396377.1 putative transposase ORF2, IS66 family VFG1698 Protein 7e-48 96
ECED1_0319 YP_002396377.1 putative transposase ORF2, IS66 family VFG1665 Protein 4e-38 74
ECED1_0319 YP_002396377.1 putative transposase ORF2, IS66 family VFG1737 Protein 3e-35 64