Gene Information

Name : insB (ECED1_2453)
Accession : YP_002398374.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Unknown
Product : IS1 transposase InsAB'
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1662
EC number : -
Position : 2398536 - 2399039 bp
Length : 504 bp
Strand : -
Note : Evidence 1b : Function experimentally demonstrated in the studied species; PubMedId : 9689094; Product type h : extrachromosomal origin

DNA sequence :
ATGCCGGGCAACTGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGT
AACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGCTATGTCGGGGCTAAAT
CGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATG
GCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGA
ATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGC
AGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTAT
CTGAATATAAAACACTATCAATAA

Protein sequence :
MPGNCPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTM
ATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY
LNIKHYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 2e-75 98
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 2e-75 98
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 2e-75 98
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 8e-73 97
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 7e-74 95
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 4e-73 93
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 4e-73 93
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 1e-72 92
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 2e-72 92
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 1e-55 92
aec38 AAW51721.1 InsB Not tested AGI-3 Protein 1e-57 91
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 9e-71 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
insB YP_002398374.1 IS1 transposase InsAB' VFG0612 Protein 2e-71 90