Gene Information

Name : ECED1_2446 (ECED1_2446)
Accession : YP_002398369.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Unknown
Product : Baseplate assembly protein GpJ
Function : -
COG functional category : R : General function prediction only
COG ID : COG3948
EC number : -
Position : 2393953 - 2394861 bp
Length : 909 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type h : extrachromosomal origin

DNA sequence :
ATGCCGATTATCGACCTGAACCAGCTACCCGCACCGGATGTGGTCGAGGAGCTGGACTTTGAAACCATTCTTGCTGAACG
CAAGGCGACACTGATTTCCCTTTACCCGGAAGACCAGCAGGAGGCGGTCGCCCGTGCCCTGATGCTGGAATCCGAGCCTC
TCGTCAAACTGCTGGAGGAAAATGCTTATCGTGAGCTTATCTGGCGTCAGCGTGTGAATGAGGCCGCACGGGCGGTAATG
CTGGCCTGTGCCGCCGGTAATGACCTTGATGTGATTGGTGCCAATTACAACACCACGCGTCTGACTATCACCCCGGCAGA
TGATTCGACCCTCCCGCCGACACCGGCCGTGATGGAATCTGACACGGATTATCGTCTGCGTATTCAGCAGGCGTTTGAAG
GTTTAAGCGTCGCCGGGTCGGTGGGGGCTTATCAGTATCATGGTCGCAGTGCCGACGGGCGTGTCGCGGATATCTCTGTC
ACCAGTCCGTCTCCGGCCTGCGTCACCATCTCTGTGCTGTCACGTGAAAATAACGGTGTCGCATCCGAAGACCTGCTGGC
GGTGGTGCGTAACGCCCTTAATGGCGAGGACGTCAGGCCGGTGGCCGACCGCGTGACCGTGCAGTCTGCCGCCATCGTTG
AATACCAGATAAACGCCACGCTTTACCTTTACCCTGGTCCCGAAAGCGAACCCATCCGCGCTGCTGCCGTGAAAAAACTG
GAAGCGTACATCACGGCACAGCACCGGCTGGGGCGCGACATCCGTCTGTCTGCCATTTATGCCGCTTTGCATGTGGAAGG
CGTGCAGCGTGTCGAACTGGCTGCACCACTGGTCGATATCGTGCTCAACAGTACGCAGGCGTCTTTCTGTACCGAATACC
ACGTCGTGACCGGAGGCTCGGATGAGTGA

Protein sequence :
MPIIDLNQLPAPDVVEELDFETILAERKATLISLYPEDQQEAVARALMLESEPLVKLLEENAYRELIWRQRVNEAARAVM
LACAAGNDLDVIGANYNTTRLTITPADDSTLPPTPAVMESDTDYRLRIQQAFEGLSVAGSVGAYQYHGRSADGRVADISV
TSPSPACVTISVLSRENNGVASEDLLAVVRNALNGEDVRPVADRVTVQSAAIVEYQINATLYLYPGPESEPIRAAAVKKL
EAYITAQHRLGRDIRLSAIYAALHVEGVQRVELAAPLVDIVLNSTQASFCTEYHVVTGGSDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4613 NP_458695.1 probable phage baseplate assembly protein Not tested SPI-7 Protein 6e-91 63
t4307 NP_807903.1 phage baseplate assembly protein Not tested SPI-7 Protein 6e-91 63
unnamed ABR13480.1 predicted baseplate or tail fiber base Not tested PAGI-6 Protein 1e-65 58