Gene Information

Name : ECED1_0230 (ECED1_0230)
Accession : YP_002396303.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Virulence
Product : putative ATP-dependent Clp proteinase Aec27 ATP-binding chain, with chaperone activity
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 251006 - 253768 bp
Length : 2763 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf : putative factor

DNA sequence :
ATGATCCAGATTGATTTAGCCACGCTCGTAAAGCGGCTTAACCCCTTTGCAAAACAGGCGCTGGAAATGGCTGCCTCGGA
GTGTATGAGCCAGCAGGCCAGTGAGATCACCGTTGCCCATGTGCTGTTACAGATGCTGGCAATCCCGCGCAACGACGTAA
GGGTGATTGCCGAACGCACAGGCATCAGTGCGGAGGATTTACGCCAGGCGCTGACCGTGGAGAGTTATCCCGGTGGACGT
TCCGCCGAAGGCTATCCCAGCTTCTCCCCGATGCTGATCGAATGGCTCAAGGAGTCATGGCTGCTGGCCTCAGCCCAGAT
GCAGCACAGCGAACTGCGCAGCGGCGTCCTGCTGCTTACTCTGCTGCATTCACCGCTGCGCTATATTCCACCCGCTGCTG
CCCGTCTGCTGACGGCCATAAACCGCGACCAGTTACAGCAGGATTTCGCAGCATGGACAAAAGAATCCGCCGAATCCGTG
GATCTGGCTGGCGGGCAAACGCCCCGCGCAACGGAAACCGGCGACACCCTGCTTGCCCGCTACGCCAAAAACATGACCGC
AGACGCCCGTAACGGCAGGCTTGACCCGGTACTGTGCCGCAACTATGAAATCGACCTGATGATCGACATTCTCTGCCGCC
GCCGTAAAAACAATCCGGTGGTAGTGGGCGAAGCAGGCGTGGGTAAAAGCGCGCTGATTGAAGGGCTGGCGCTGCGCATC
GTGGCAGGCCAGGTGCCGGACAAGCTGAAAAACACCGATATCATGACCCTTGACCTGGGCGCATTGCAGGCCGGTGCGTC
GGTGAAAGGTGAGTTTGAAAAACGCTTCAAGGGGCTGATGGCGGAGGTCATTTTCTCCCCGGTGCCGGTCATTCTGTTTA
TCGACGAAGCACATACCCTGATTGGCGCGGGCAACCAGCAGGGCGGGCTGGATATATCCAACCTGCTCAAACCAGCGCTG
GCGCGCGGCGAGCTGAAAACCATCGCCGCCACCACCTGGAGCGAGTACAAAAAATATTTCGAGAAAGATGCAGCTTTGTC
GCGCCGCTTCCAGTTAGTGAAGGTCAGCGAACCCAACGCTGCCGAAGCCACCATTATTCTGCGCGGTTTGTCGGCGGTCT
ATGAACAATCTCACGGCGTGCTGATTGATGATGACGCCTTGCAGGCCGCTGCGACACTGAGCGAGCGTTATCTCTCCGGG
CGTCAGTTGCCGGACAAAGCCATTGATGTGCTGGACACCGCCTGCGCCCGTGTGGCCATCAACCTGTCATCGCCGCCAAA
ACAAATCTCGGCACTGACCACCCTGAGCCACCAGCAGGAGGCAGAAATTCGCCAGCTTGAGCGCGAGCTTCGCATCGGGC
TGCGTACCGACACCTCACGAATGACTGAGGTGTTGGAGCAGTATGATGAAACGCTGTCGGCGCTGGACGAACTGGAAGTC
GCCTGGCAGCAGCAGCAGACGCTGGTACAGGAAATTATCGCGCTGCGCCAGCAGTTACTGGGCGTGGCAGAAGACGACGT
TGCGTCGTTGCCGGACGCAGATGCCGTGGAGGATACGCCGCCAGAGGCAGAACAGGATAGTACCGATGCCGAATCGGCTG
ATGATGCAGGCAGCGTACAGCCGGAAGAGACCACTGAAACAGTTTCCCCGGTACAACGGCTGGCACAACTCACTGCCGAA
CTGGACGCCCTGCATAACGACCAGTTGCTGGTTTCCCCGCATGTCGATAAAAAACAGATTGCAGCGGTGATTGCTGAATG
GACCGGCGTGCCGCTTAACCGCCTGTCACAGAATGAGATGTCGGTCATCACCGACCTGCCGGTATGGCTCGGCGGCACCA
TCAAGGGCCAGGACCTGGCGATTGCCAGCCTGCATAAACACCTGCTGACCGCACGCGCCGACCTGCGCCGTCCGGGACGC
CCGCTTGGTGCGTTCCTGCTGGCTGGCCCCAGCGGCGTGGGTAAAACCGAAACCGTCCTGCAACTGGCGGAACTGCTCTA
TGGCGGACGTCAATACCTGACCACCATCAATATGTCTGAGTTCCAGGAGAAACACACCGTTTCGCGGCTGATTGGCTCTC
CTCCGGGTTATGTCGGCTACGGTGAAGGCGGCGTACTGACCGAAGCGATTCGCCAGAAACCGTACTCGGTGGTGCTGCTC
GATGAAGTAGAAAAAGCGCACCCGGATGTACTCAACCTGTTCTACCAGGCGTTTGACAAGGGCGAGATGGCAGACGGTGA
AGGCCGCCTGATTGACTGTAAAAATATCGTTTTCTTCCTGACCTCCAACCTTGGCTACCAGGTGATTGTCGAACACGCCG
ATGACCCGGAAACCATGCAGGAAGCCCTCTATCCGGTGCTGGCGGACTTCTTTAAACCTGCTCTGCTGGCGCGCATGGAA
GTGGTGCCTTACCTACCGCTGTCGAAAGAGACGCTCGCTACCATTATTGCCGGGAAACTGGCCCGCCTGGATAACGTGCT
GCGCAGCCGCTTTGGCGCGGACGTGATTATTGGGCCGGAAGTGACGGACGAAATCATGAGCCGCGTCACCCGCGCGGAAA
ACGGCGCGAGGATGCTGGAATCGGTTATCGACGGCGACATGCTGCCGCCGCTCTCGCTGCTGCTGTTGCAGAAAATGGCG
GCCAACACGGCGATTGCCCGGATTCGCCTGTCGGCGGCAGACGGTGCGTTCACGGCAGATGTGGAAGATGCGCTGCCTGA
TGATGCCGTGACACCGCAAACAGAGGACGAAACGGTTTTATGA

Protein sequence :
MIQIDLATLVKRLNPFAKQALEMAASECMSQQASEITVAHVLLQMLAIPRNDVRVIAERTGISAEDLRQALTVESYPGGR
SAEGYPSFSPMLIEWLKESWLLASAQMQHSELRSGVLLLTLLHSPLRYIPPAAARLLTAINRDQLQQDFAAWTKESAESV
DLAGGQTPRATETGDTLLARYAKNMTADARNGRLDPVLCRNYEIDLMIDILCRRRKNNPVVVGEAGVGKSALIEGLALRI
VAGQVPDKLKNTDIMTLDLGALQAGASVKGEFEKRFKGLMAEVIFSPVPVILFIDEAHTLIGAGNQQGGLDISNLLKPAL
ARGELKTIAATTWSEYKKYFEKDAALSRRFQLVKVSEPNAAEATIILRGLSAVYEQSHGVLIDDDALQAAATLSERYLSG
RQLPDKAIDVLDTACARVAINLSSPPKQISALTTLSHQQEAEIRQLERELRIGLRTDTSRMTEVLEQYDETLSALDELEV
AWQQQQTLVQEIIALRQQLLGVAEDDVASLPDADAVEDTPPEAEQDSTDAESADDAGSVQPEETTETVSPVQRLAQLTAE
LDALHNDQLLVSPHVDKKQIAAVIAEWTGVPLNRLSQNEMSVITDLPVWLGGTIKGQDLAIASLHKHLLTARADLRRPGR
PLGAFLLAGPSGVGKTETVLQLAELLYGGRQYLTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRQKPYSVVLL
DEVEKAHPDVLNLFYQAFDKGEMADGEGRLIDCKNIVFFLTSNLGYQVIVEHADDPETMQEALYPVLADFFKPALLARME
VVPYLPLSKETLATIIAGKLARLDNVLRSRFGADVIIGPEVTDEIMSRVTRAENGARMLESVIDGDMLPPLSLLLLQKMA
ANTAIARIRLSAADGAFTADVEDALPDDAVTPQTEDETVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 0.0 99
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 0.0 99
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-123 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECED1_0230 YP_002396303.1 putative ATP-dependent Clp proteinase Aec27 ATP-binding chain, with chaperone activity VFG2084 Protein 0.0 57
ECED1_0230 YP_002396303.1 putative ATP-dependent Clp proteinase Aec27 ATP-binding chain, with chaperone activity VFG2076 Protein 5e-138 41