Gene Information

Name : ECED1_2261 (ECED1_2261)
Accession : YP_002398200.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Resistance
Product : putative type IV secretory pathway VirB1 component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2198922 - 2199650 bp
Length : 729 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 14731283, 15546668, 16428391; Product type ps : putative structure

DNA sequence :
TTGTTTACTGAGGTCACCATGCTTTCCACCACAGCCTTTCTGGCGATAGCCATGCAGTGCGCCGCCAGCATTCATCCGTC
CACGGCATTCGACGTGGCACGGGTGGAATCCGGTTTTAACCCTTATGCCATCGCTGAGATTGTCCCGAAGGCCGGCCCCT
CTTTCGGCGATCAACACATTATTTCTCACCTGCCAGCCAGCCGGGGAGATGCAGAGCATATTCTCCGTCGCCTGTCAGCA
CAGGATCGCCGTTACTCTGTCGGGCTGATGCAAATCACCAGCACCAATTTCCGCCATTATGGTGTGTCCGCCACAGAGCT
ACTTGATCCCTGTACCAATCTGTCCGTCTTCGAACACATTCTCAGAGACTGCTACCGGCGCGGCGGCACGCTGAAAAGGG
CGCTGAGTTGTTATTATTCCGGCAATTTCAGTACCGGGCAACAACCTGAAACGGCGTTTTCCGGAACGAGCTATATCCAG
CGAATCGGTTATCCGCCGGGATCATCCCGCTATGCGGTCCCCGGAACCCGTGAGGACAAATCATCAGTTGCCGTTCCCCT
GAAAACCGCCCCTGCCAGTGACTCATCCCGTCACCACGTGTTCTGGCCCGGAGTCGTCGTCCGTGGCGTCCCTGCGAAAC
TCCGCCAAGAAAAAATCTTCATCGCACCTTTCTCCGCGCCGTCAGTGCGCCGGAGTTTCTCCCTGTCACCCCGTGAGGAG
GAGGAATAA

Protein sequence :
MFTEVTMLSTTAFLAIAMQCAASIHPSTAFDVARVESGFNPYAIAEIVPKAGPSFGDQHIISHLPASRGDAEHILRRLSA
QDRRYSVGLMQITSTNFRHYGVSATELLDPCTNLSVFEHILRDCYRRGGTLKRALSCYYSGNFSTGQQPETAFSGTSYIQ
RIGYPPGSSRYAVPGTREDKSSVAVPLKTAPASDSSRHHVFWPGVVVRGVPAKLRQEKIFIAPFSAPSVRRSFSLSPREE
EE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP70283.1 Pilx1/VirB1-like protein Not tested HPI Protein 2e-108 99

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECED1_2261 YP_002398200.1 putative type IV secretory pathway VirB1 component BAC0396 Protein 4e-48 49