Gene Information

Name : irp (ECED1_2252)
Accession : YP_002398191.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Virulence
Product : putative thioesterase YbtT
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG3208
EC number : -
Position : 2190067 - 2190870 bp
Length : 804 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme

DNA sequence :
GTGACGCAATCTGCAATGTGCATCCCGCTGTGGCCCGCCCGGAACGGCAATACTGCGCATCTGGTCATGTGCCCTTTCGC
TGGCGGCAGCAGTAGCGCGTTTCGCCACTGGCAAGCTGAGCAACTGGCTGATTGCGCGCTTTCTCTGGTGACCTGGCCGG
GGCGCGATCGCCTTCGCCATCTGGAACCGCTCAGAAGCATTACACAACTGGCGGCACTGCTGGCGAACGAGCTGGAAGCA
TCCGTATCGCCTGACACGCCGCTTTTACTCGCCGGGCACAGCATGGGGGCGCAGGTGGCGTTTGAAACCTGCCGACTTCT
GGAGCAACGGGGGCTTGCGCCACAAGGACTGATTATTTCCGGGTGCCATGCCCCGCATCTGCATTCTGAACGCCAGCTCA
GCCATCGCGATGATGCCGACTTTATCGCTGAGCTGATAGACATTGGCGGATGTTCTCCTGAACTGCAGGAAAACCAGGAA
TTAATGTCGCTGTTTCTTCCTCTTCTGCGCGCTGATTTTTACGCCACCGAGAGCTATCACTACGACTCGCCCGACGTCTG
TCCGCCGCTGCGCACGCCTGCGCTGTTATTGTGCGGCAGCCACGATCGCGAAGCCTCCTGGCAGCAGGTCGATGCCTGGC
GTCAGTGGCTGAGCCACGTTACAGGCCCGGTGGTGATTGACGGCAATCATTTCTATCCCATTCAACAAGCCCGGTCCTTT
TTTACGCAGATTGTCCGCCATTTTCCCCACGCATTTTCTGCAATGACCGCGTTGCAAAAACAGCCCAGTACTTCAGAAAG
GTGA

Protein sequence :
MTQSAMCIPLWPARNGNTAHLVMCPFAGGSSSAFRHWQAEQLADCALSLVTWPGRDRLRHLEPLRSITQLAALLANELEA
SVSPDTPLLLAGHSMGAQVAFETCRLLEQRGLAPQGLIISGCHAPHLHSERQLSHRDDADFIAELIDIGGCSPELQENQE
LMSLFLPLLRADFYATESYHYDSPDVCPPLRTPALLLCGSHDREASWQQVDAWRQWLSHVTGPVVIDGNHFYPIQQARSF
FTQIVRHFPHAFSAMTALQKQPSTSER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ybtT AAA93463.1 yersiniabactin biosynthesis thioesterase-like protein Virulence HPI Protein 3e-117 99
ybtT NP_669709.2 yersiniabactin thioesterase Virulence HPI Protein 5e-115 99
ybtT YP_070121.1 yersiniabactin biosynthetic protein YbtT Virulence HPI Protein 5e-115 99
ybtT YP_853078.1 yersiniabactin biosynthetic protein YbtT Virulence PAI IV APEC-O1 Protein 1e-115 99
irp4 YP_002346899.1 yersiniabactin biosynthetic protein YbtT Virulence HPI Protein 4e-117 99
ybtT NP_993004.1 yersiniabactin biosynthetic protein YbtT Virulence HPI Protein 4e-117 99
ybtT CAA21393.1 - Virulence HPI Protein 4e-117 99
irp4 YP_001006818.1 yersiniabactin biosynthetic protein YbtT Virulence HPI Protein 1e-113 96
irp4 CAA73129.1 Irp4 protein Virulence HPI Protein 6e-114 96
nrpT YP_002152320.1 siderophore biosynthetic protein Virulence Not named Protein 1e-38 43