Gene Information

Name : ibrB (ECED1_1156)
Accession : YP_002397177.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Virulence
Product : transcriptional regulator IbrB
Function : -
COG functional category : K : Transcription
COG ID : COG1475
EC number : -
Position : 1160498 - 1161142 bp
Length : 645 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type h : extrachromosomal origin

DNA sequence :
ATGGGGAATTCTGTGACACCAGAGGTGGAGGTGCTGAGCAAGATGATTCGACAGTACTTCAGTCAGGAACAATCTGAAGA
GAAAACCATACAGGCCCTGAACCATCTCCGCTGCGTACTCCATGAGATCAGCCCCTTTGCTCAAGAACCAGTGGACTGTG
TGCTGTGGGTAAAAGCGGATGAAATTGTCGCTAACGATTATAATCCCAATGTCATGGCCCCAAGCGAAAAAAAATTACTG
AAACAATCTCTGGAAAAAGACGGTTTTACTCAACCAATTGTTGTTTCGGAAGAAACAAGCCATTACCTGGTGGTGGATGG
TTTTCATAGGCAGTTACTAGGTAGAAGAACAGTTACTGGAAAACGCCTGAAAGGCTGGCTACCAGTAACCTGTATTAATC
CAGACCGAAAGGGACAAACCTCACGTATTGCCGCGACTATCCGACATAACAGAGCCAGGGGGAAACACCAGATAACCTCA
ATGTCTGATATTGTCAGAGATCTTTCACGTCTTGGCTGGACTGATGAACGTATCGGAACAGAACTGGGGATGGACCAGGA
TGAAGTTCTGAGGTTAAAGCAGATTAGCGGGCTAACGGAGTTATTTCAGCAGGCAGATTTCAGCCCTGCATGGACTGTTA
CATAA

Protein sequence :
MGNSVTPEVEVLSKMIRQYFSQEQSEEKTIQALNHLRCVLHEISPFAQEPVDCVLWVKADEIVANDYNPNVMAPSEKKLL
KQSLEKDGFTQPIVVSEETSHYLVVDGFHRQLLGRRTVTGKRLKGWLPVTCINPDRKGQTSRIAATIRHNRARGKHQITS
MSDIVRDLSRLGWTDERIGTELGMDQDEVLRLKQISGLTELFQQADFSPAWTVT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 4e-83 89
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 4e-83 89
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 6e-85 89
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-69 88
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-69 88
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-69 88
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 3e-82 87
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 3e-82 87
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 2e-71 76
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 6e-72 75
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 3e-25 48
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 2e-26 48
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 4e-26 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ibrB YP_002397177.1 transcriptional regulator IbrB VFG1505 Protein 3e-85 89