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Name : VS_II0296 (VS_II0296) Accession : YP_002394896.1 Strain : Genome accession: NC_011744 Putative virulence/resistance : Unknown Product : Methyl-accepting chemotaxis protein Function : - COG functional category : N : Cell motility COG ID : COG0840 EC number : - Position : 337828 - 339699 bp Length : 1872 bp Strand : - Note : - DNA sequence : ATGAAATTTAGCCATAAGGTGGTTGCAGCATCATCAGCCTTGCTATTAGTGACAGTATCATTGCTTTCAATACAGCAACT TTACACCGTAAAAAGTGCTGTAGAGAACCACGTCAATGCAAGCCTGAAAGAGATGGTCTCTGGTATTAAGAACACCGTAG CATCAGAGATGAATGCTAAGAAAGCACTGGCTCAGTCGACGACTGAAGTCATCGAAATCAACCCTCAAGATCGTACCTAC GTTCAAAACATCCTAGAAAAGCCAAAACTTAAAGGCAGCTTTCTCGCGGTTGGTTTTGGTTATGACGCAAACGGTTTCGT TATTGAAAATGATGATGGCTGGGAAGCTGGGCCGGATTATGACCCACGAATCCGCCCTTGGTTCATTGATGCTAAGTCCA AAAACAGTTTAGTTGTTACCGACCCTTATGTGGACGTATCAAGCAAAAAAGTCATCATTTCAATTGGTACGCCAGTGCAA GAAAACGGCCGTTTCACTGCAGGTATGTTCTACGACCTAGAACTAACCAACCTTGCGACCTTGGTAAACCAAGTGAACTT GTTTGACGCGGGCTACTTATTCCTAGTCACTGCCGACGGCACGACGATTGCTCACCCTAATGCTAAGAACAATGGCGAAA CGCTATCAAGCTACCTGCCACAAGCGACTATTCGCGAGGGATCTCAACAAATTGAAGTCGACGGTAAAAAGTTCCTAGTG AACTTCACTCACATCCCAAGTGAAGATTGGTACATTGGCGCAATACTTGATGAAGAGATCGCATTCCAAACGGTTGAAGA TCTGAAAAACAGCTCGATAATCTACTCTTTAATTGCGGTTATTCTCAGCATCATTGCATTAACCGTCCTTATTCGTGTGT TAATGCGCCCGCTTGAGACGCTTAACCAAGCCATTCAAGATGTTGCGAGCGGACAAGGTGACTTAACTAAACGTCTAGAT ACCAATACAGATAAAGAGTTCTCTGACCTTGCGAAAGGCTTCAACACCTTTACTGAAAACCTGCAAAATCAAATCATTCA ATCCAAAGCGATTGGTGTTGAGATTAAACGTGGCACTGAAATCACAGTAAAAGGCGCGGGTGAGTCAGCGAATGCGATGA ATACTCAGCTGCAAGAGCTTGAACAGCTAGCCACCGCAATGAACGAGATGGCCGTTACCGCAACGGAAGTAGCAAACAAC GCTCAAGGCGCAGCCGCCGCGGCTCGTGAAGCTGACGATGCGACACTAGACGGTACATCTGTAGTAAGTGACACGACTCA AGCGATTGATAACCTTTCAGCGCGTATCGACCAAGCGGTTGCAGAAGTACAAGTACTTGAATCAGCAACAGCAAATATCG AGACGATTCTTAAAGTAATCAACGATATCGCAGACCAAACCAACCTACTTGCATTGAATGCTGCTATTGAAGCGGCGCGT GCTGGTGAATCGGGCCGTGGTTTCGCTGTCGTTGCCGATGAAGTTCGCACACTAGCGCAACGTACTCAAGAATCGACCAC AGAGATCCGCAACATGATTGAGCAGCTCCAAGCGGGTGCAAGCTCTGTATCTAACGCGATGAATCAAAGTAAAGACACAG CCACTGACGCCGTTGAACGCGCTCAGCAAGCAAACTCTTCACTTGACCGCATCCGCGACGCGATTCAGCGCATCTCTGAT ATGAATATTCAGATTGCTTCAGCAGCTGAAGAGCAGAGTTTAGTAGCGGAAGAGATCAACAACAACACAGTTAAGATCAA AGACCTTTCAACACAGGTATCGAACGCAGCTCAAGACGCAAACACAGCAATGCAAGTTCAAACTGACAATGTTCGCCAAC AAGACGAACTATTAAACAAGTTTACGGTTTAA Protein sequence : MKFSHKVVAASSALLLVTVSLLSIQQLYTVKSAVENHVNASLKEMVSGIKNTVASEMNAKKALAQSTTEVIEINPQDRTY VQNILEKPKLKGSFLAVGFGYDANGFVIENDDGWEAGPDYDPRIRPWFIDAKSKNSLVVTDPYVDVSSKKVIISIGTPVQ ENGRFTAGMFYDLELTNLATLVNQVNLFDAGYLFLVTADGTTIAHPNAKNNGETLSSYLPQATIREGSQQIEVDGKKFLV NFTHIPSEDWYIGAILDEEIAFQTVEDLKNSSIIYSLIAVILSIIALTVLIRVLMRPLETLNQAIQDVASGQGDLTKRLD TNTDKEFSDLAKGFNTFTENLQNQIIQSKAIGVEIKRGTEITVKGAGESANAMNTQLQELEQLATAMNEMAVTATEVANN AQGAAAAAREADDATLDGTSVVSDTTQAIDNLSARIDQAVAEVQVLESATANIETILKVINDIADQTNLLALNAAIEAAR AGESGRGFAVVADEVRTLAQRTQESTTEIRNMIEQLQAGASSVSNAMNQSKDTATDAVERAQQANSSLDRIRDAIQRISD MNIQIASAAEEQSLVAEEINNNTVKIKDLSTQVSNAAQDANTAMQVQTDNVRQQDELLNKFTV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0514 | NP_230165.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 4e-101 | 50 |
