Gene Information

Name : VS_II1475 (VS_II1475)
Accession : YP_002396034.1
Strain :
Genome accession: NC_011744
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1610439 - 1611113 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence : 
GTGAAAATACTAATTATCGAAGATGACACCACCACAAGAGAATTTGTGGCCAAAGGTCTTGAAGAGCATGGTTATGCGGT
CGACCAAGCAGAAGATGGCAAGAAAGGCTTAATGATGGCGTTAAGCTCCGAGTATCAACTGGTTATTCTTGATCGCATGT
TGCCGTATTTGGATGGAATGAAAGTTCTCTCAGCGATTAAAGCGACAGAAGAAAATTTACCGGTATTAATTTTGAGTGCC
ATGGACAGCGTGGAAGATCGCGTAAGTGGCCTTCAAGCAGGAAGTGATGATTATCTGATAAAACCTTTTGCTCTGGCTGA
GCTTGTTGCACGCGTAGACATCATTATCAATAGAACTAAACGTCAGCCCGTTACTGAGACAAATTTGATATATGACTGCT
TAGATATCGATTTACGCGCTCATAGAGTAGTGTGTAAAAATCAAGATCTCCAATTGCAACCCAAAGAGTTTCAACTGATT
CAGTATTTTGTTGAGCACAGCGAGCAAGTTGTCTCAAGGATGCGCTTGTTTGAGGCGATTTGGAGCTACCACTTTGACCC
GAAAACCAATGTCATTGATGTTCATGTCGCCAATTTAAGAAGGAAGCTTGAAGAAGCTGGTTGCCCTGATTTGCTTCATA
CAGTGAGAGGGGCAGGTTATGTCCTTCGTCGATGA

Protein sequence : 
MKILIIEDDTTTREFVAKGLEEHGYAVDQAEDGKKGLMMALSSEYQLVILDRMLPYLDGMKVLSAIKATEENLPVLILSA
MDSVEDRVSGLQAGSDDYLIKPFALAELVARVDIIINRTKRQPVTETNLIYDCLDIDLRAHRVVCKNQDLQLQPKEFQLI
QYFVEHSEQVVSRMRLFEAIWSYHFDPKTNVIDVHVANLRRKLEEAGCPDLLHTVRGAGYVLRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-37 45
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-36 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VS_II1475 YP_002396034.1 DNA-binding response regulator BAC0125 Protein 6e-40 43
VS_II1475 YP_002396034.1 DNA-binding response regulator BAC0347 Protein 4e-43 42
VS_II1475 YP_002396034.1 DNA-binding response regulator BAC0308 Protein 7e-42 42
VS_II1475 YP_002396034.1 DNA-binding response regulator BAC0197 Protein 1e-37 42
VS_II1475 YP_002396034.1 DNA-binding response regulator BAC0487 Protein 2e-26 41
VS_II1475 YP_002396034.1 DNA-binding response regulator BAC0638 Protein 3e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VS_II1475 YP_002396034.1 DNA-binding response regulator VFG0596 Protein 5e-38 45
VS_II1475 YP_002396034.1 DNA-binding response regulator VFG1389 Protein 4e-42 44
VS_II1475 YP_002396034.1 DNA-binding response regulator VFG1390 Protein 3e-42 41