Gene Information

Name : VS_II0144 (VS_II0144)
Accession : YP_002394746.1
Strain :
Genome accession: NC_011744
Putative virulence/resistance : Virulence
Product : TRAP dicarboxylate transporter subunit DctM
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1593
EC number : -
Position : 153439 - 154719 bp
Length : 1281 bp
Strand : -
Note : -

DNA sequence : 
ATGACGTTAGCCATTTTCTTATCGGTATTGATTGTCTCAATCTTACTTGGTCTTCCTGTTGCGTTTGCACTGTTATTGTC
TTCAATGGCGCTGATGCTTCACATGGACTTCTTTAGTGCAGACATTCTTGCGCAGTCTTTAATTAATGGTGTCGACAGCT
TCACTCTGCTTGCCATTCCATTCTTCCTCATTGCGGGTGAAGTAATGGCATCGGGTGGTTTGTCGCAGCGTATTGTTCGC
CTAGCAACCACTTACGTGGGACACCGTCAAGGTGGCTTAGGTTACGTTGCAATCATGACTTCGGTACTGCTTGCTGGCCT
TTCTGGTTCAGCTGTAGCAGATGCAGCAGCCTTGGTCAGTATTCTTTACCCAATGATGAAAGCCGCGAAATACCCAGAAG
CACCTTCAATGGGCTTACTTGCTTCAGGCGGTATCATCGCACCCGTTATTCCACCTTCAATCCCTCTGATCCTTGTAGGT
GTTGCTGGCGGTATCTCGATCAAAAACCTGTTCCTAGGCGGCATCGTTCCTGGCCTGTTAATGGGTATGACATTGATGTT
TGTGTGGCGCTGGACGGTTCGTAAAGAAAACTTAGAAACGTCTGAACGTGCAACAAAGGCTGAAAAACGCGCGGCACTTA
AAGATGGCGTATGGGCATTGATGTTACCAGTCATCATCATTGTCGGTATTCGCTTTGGTATTTTTACACCGACAGAAGCC
GCTGTAGTCGCCGCCACTTACGCTATTTTCATCTCAACGTTTGTTTATAAAGAACTCACTATTAAGAAGTTCTACCACAT
CGTACTCAACGCAGGTCGCTCGACCGCAATGGTTATGTTCTTGGTGGGTTGTGCAATGGTTGCAGCGTGGTTAATTACTG
TTGCTCAGCTTCCTCAACAACTCGCAGAAATGTTAGGTCCACTGGTGGATAGCCCACGCCTATTAATGGCAGTAATTATG
TTGCTCGTACTTTGTGTCGGCATGGTTATGGACTTGAGCCCAACGATTCTAATCCTTGTACCCCTTTTAATGCCTGTCAT
CAAGATGGCTGGGATTGACCCAACGTACTTCGGCCTACTGTTCGTTATCAACTGTTCAATTGGCTTGATTACGCCTCCTG
TAGGCACCGTACTAAACGTAGTGTGTGGTGTAGCGAGAGTACCAATGTCGACTGCAGTGAAAGGTGTATTGCCCTTCATC
GCGGCTTACATGGCTCTGCTCACACTGTTTGTCATCTTCCCAAGCATTATCACTGTGCCAATGTCGTTTGTCATTGGTTA
A

Protein sequence : 
MTLAIFLSVLIVSILLGLPVAFALLLSSMALMLHMDFFSADILAQSLINGVDSFTLLAIPFFLIAGEVMASGGLSQRIVR
LATTYVGHRQGGLGYVAIMTSVLLAGLSGSAVADAAALVSILYPMMKAAKYPEAPSMGLLASGGIIAPVIPPSIPLILVG
VAGGISIKNLFLGGIVPGLLMGMTLMFVWRWTVRKENLETSERATKAEKRAALKDGVWALMLPVIIIVGIRFGIFTPTEA
AVVAATYAIFISTFVYKELTIKKFYHIVLNAGRSTAMVMFLVGCAMVAAWLITVAQLPQQLAEMLGPLVDSPRLLMAVIM
LLVLCVGMVMDLSPTILILVPLLMPVIKMAGIDPTYFGLLFVINCSIGLITPPVGTVLNVVCGVARVPMSTAVKGVLPFI
AAYMALLTLFVIFPSIITVPMSFVIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 5e-42 42
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 5e-42 42
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 4e-42 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VS_II0144 YP_002394746.1 TRAP dicarboxylate transporter subunit DctM VFG1110 Protein 2e-42 42