Gene Information

Name : VS_II0119 (VS_II0119)
Accession : YP_002394721.1
Strain :
Genome accession: NC_011744
Putative virulence/resistance : Resistance
Product : heavy metal membrane efflux protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 130935 - 131990 bp
Length : 1056 bp
Strand : -
Note : -

DNA sequence :
ATGAAGCCAAAATTAGGTTTTCTAGATCGCTACTTAACGCTGTGGATCTTTATTGCCATGGGTCTTGGTGTACTGCTTGG
CACCTTGTTCCCACAGATCGAGCAGTGGAACGAATCTATGTCGGTTGGTACCACCAACATTCCACTTGCGATTGGCCTTA
TCTTAATGATGTACCCGCCTCTGGCTAAGGTTAACTACAACCTATTAGGCACTGTGGTCAAAGATAAGAAAGCCATCAAA
CTATCTTTGATCATGAACTGGCTTGTTGGCCCAATTCTGATGTTTGTGTTGGCACTGACTTTCTTGGGTGACCACCCAGG
TTACATGGTCGGCGTGATTCTGATTGGTCTTGCTCGTTGTGTGGCGATGGTTCTGGTTTGGAACGACATCGGCGGCGGTA
ACAAAGAATACGGTGCGGCATTAGTTGCTCTAAACAGTGCATTCCAAGTGGTGAGCTACAGCTTTATGGCGTGGCTATTC
ATCAGTGTCCTACCACCGGTATTCGGTTACGAAGGCATGATGGTTGATATCTCAATGATCGATATTGCACACAGTGTACT
TATCTACCTAGGTATCCCATTCCTAGCGGGCTTCCTAAGCCGTAAGATCCTAGTGTCGATGAAGGGTGAGCAGTGGTACA
ACGATGTGTTTATTCCTCGCATCTCTCCAATCACACTGATTGCACTACTGGCCACTATCGTTCTGATGTTCAGCCTAAAA
GGCGAGATGATTGTTGAGCTACCAATGGACGTATTGTTGATTGCGGTTCCACTGACTATCTACTTCACAGCGATGTTCTT
CATCAGCTTCTTCATTGCTAAGAAGATGGGTATTGAATACGACAAGAACGCTTCAATTGCATTCACAGCGACAGGTAACA
ACTTCGAGCTAGCGATTGCCGTTGCTATCTCAGTATTCGGTATCAACTCAGACCAAGCGTTTGCCGGTGTTATCGGTCCA
CTGATTGAAGTACCTGTGTTGATTTACCTAGTGAACGTGGCGCTTAAGATGAAAGACAAGTACTACAACGGTCAGACGGT
TAAACCTAGCGTCTAG

Protein sequence :
MKPKLGFLDRYLTLWIFIAMGLGVLLGTLFPQIEQWNESMSVGTTNIPLAIGLILMMYPPLAKVNYNLLGTVVKDKKAIK
LSLIMNWLVGPILMFVLALTFLGDHPGYMVGVILIGLARCVAMVLVWNDIGGGNKEYGAALVALNSAFQVVSYSFMAWLF
ISVLPPVFGYEGMMVDISMIDIAHSVLIYLGIPFLAGFLSRKILVSMKGEQWYNDVFIPRISPITLIALLATIVLMFSLK
GEMIVELPMDVLLIAVPLTIYFTAMFFISFFIAKKMGIEYDKNASIAFTATGNNFELAIAVAISVFGINSDQAFAGVIGP
LIEVPVLIYLVNVALKMKDKYYNGQTVKPSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 3e-96 59
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 2e-96 59
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 4e-73 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VS_II0119 YP_002394721.1 heavy metal membrane efflux protein BAC0573 Protein 4e-94 59
VS_II0119 YP_002394721.1 heavy metal membrane efflux protein BAC0004 Protein 4e-79 53