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Name : pEFER_0041 (pEFER_0041) Accession : YP_002394588.1 Strain : Genome accession: NC_011743 Putative virulence/resistance : Virulence Product : tetracycline repressor protein TetR Function : - COG functional category : K : Transcription COG ID : COG1309 EC number : - Position : 42358 - 42984 bp Length : 627 bp Strand : + Note : Evidence 2b : Function of strongly homologous gene; Product type r : regulator DNA sequence : ATGATGTCTAGATTAGATAAAAGTAAAGTGATTAACAGCGCATTAGAGCTGCTTAATGAGGTCGGAATCGAAGGTTTAAC AACCCGTAAACTCGCCCAGAAGCTAGGTGTAGAGCAGCCTACATTGTATTGGCATGTAAAAAATAAGCGGGCTTTGCTCG ACGCCTTAGCCATTGAGATGTTAGATAGGCACCATACTCACTTTTGCCCTTTAGAAGGGGAAAGCTGGCAAGATTTTTTA CGTAATAACGCTAAAAGTTTTAGATGTGCTTTACTAAGTCATCGCGATGGAGCAAAAGTACATTTAGGTACACGGCCTAC AGAAAAACAGTATGAAACTCTCGAAAATCAATTAGCCTTTTTATGCCAACAAGGTTTTTCACTAGAGAATGCATTATATG CACTCAGCGCTGTGGGGCATTTTACTTTAGGTTGCGTATTGGAAGATCAAGAGCATCAAGTCGCTAAAGAAGAAAGGGAA ACACCTACTACTGATAGTATGCCGCCATTATTACGACAAGCTATCGAATTATTTGATCACCAAGGTGCAGAGCCAGCCTT CTTATTCGGCCTTGAATTGATCATATGCGGATTAGAAAAACAACTTAAATGTGAAAGTGGGTCTTAA Protein sequence : MMSRLDKSKVINSALELLNEVGIEGLTTRKLAQKLGVEQPTLYWHVKNKRALLDALAIEMLDRHHTHFCPLEGESWQDFL RNNAKSFRCALLSHRDGAKVHLGTRPTEKQYETLENQLAFLCQQGFSLENALYALSAVGHFTLGCVLEDQEHQVAKEERE TPTTDSMPPLLRQAIELFDHQGAEPAFLFGLELIICGLEKQLKCESGS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00282 | YP_008211608.1 | Transcriptional regulator | Not tested | AbaR26 | Protein | 8e-94 | 100 |
| tetR | AFH57203.1 | repression protein | Not tested | AbaR4a | Protein | 1e-94 | 100 |
| ABZJ_00261 | YP_005524217.1 | tetracycline repressor protein TetR | Not tested | AbaR22 | Protein | 2e-94 | 100 |
| tetR | AFV47970.1 | repressor protein TetR | Not tested | AbaR25 | Protein | 1e-94 | 100 |
| tetR | YP_005797161.1 | tetracycline repressor protein class G | Not tested | AbaR4e | Protein | 2e-94 | 100 |
| tetR | AFV47998.1 | repressor protein TetR | Not tested | delta-AbaR25 | Protein | 1e-94 | 100 |
| tetR(B) | AEQ20906.1 | tetracycline repressor protein | Not tested | Tn6166 | Protein | 2e-94 | 100 |
| tetR(B) | AEZ06046.1 | repressor protein | Not tested | Tn6167 | Protein | 2e-94 | 100 |
| BJAB07104_00278 | YP_008207743.1 | Transcriptional regulator | Not tested | AbaR25 | Protein | 8e-94 | 100 |
| tetR | AEA34668.1 | tetracycline repressor protein | Not tested | Not named | Protein | 5e-94 | 100 |
| tetR | AAL08444.1 | tet repressor | Not tested | SRL | Protein | 1e-90 | 99 |
| tetR1 | YP_005176239.1 | tetracycline repressor protein | Not tested | ICEPmu1 | Protein | 2e-64 | 66 |
| tetR2 | YP_005176247.1 | tetracycline repressor protein | Not tested | ICEPmu1 | Protein | 2e-64 | 66 |
| tetR(A) | ACK44536.1 | TetR(A) | Not tested | SGI1 | Protein | 3e-51 | 53 |
| tetR(A) | AGK07026.1 | TetR(A) | Not tested | SGI1 | Protein | 3e-51 | 53 |
| tetR | YP_006098395.1 | tetracycline repressor | Not tested | Tn2411 | Protein | 4e-51 | 53 |
| tetR(A) | AGK07084.1 | TetR(A) | Not tested | SGI1 | Protein | 3e-51 | 53 |
| tetR(A) | ACN81010.1 | repressor protein | Not tested | AbaR5 | Protein | 3e-51 | 53 |
| tetR | CAJ77065.1 | Tetracycline repressor protein | Not tested | AbaR1 | Protein | 2e-51 | 53 |
| tetR(G) | AGK06973.1 | TetR(G) | Not tested | SGI1 | Protein | 1e-45 | 49 |
| tetR(G) | AGK07103.1 | TetR(G) | Not tested | SGI1 | Protein | 1e-45 | 49 |
| tetR | AAK02050.1 | tetracycline resistance regulator protein | Not tested | SGI1 | Protein | 1e-45 | 49 |
| tetR | ABZ01841.1 | TetR | Not tested | SGI2 | Protein | 1e-45 | 49 |
| tetR | CAJ77033.1 | Tetracycline repressor protein | Not tested | AbaR1 | Protein | 1e-45 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pEFER_0041 | YP_002394588.1 | tetracycline repressor protein TetR | VFG1035 | Protein | 5e-91 | 99 |
