Name : tetD (pEFER_0038) Accession : YP_002394585.1 Strain : Genome accession: NC_011743 Putative virulence/resistance : Resistance Product : TetD, putative operon control protein Function : - COG functional category : K : Transcription COG ID : COG2207 EC number : - Position : 39864 - 40280 bp Length : 417 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 10781570, 6094472, 6094471; Product type pr : putative regulator DNA sequence : ATGTATATTGAACAGCATTCTCGCTATCAAAATAAAGCTAATAACATCCAATTAAGATATGATGATAAGCAGTTTCATAC AACGGTTATCAAAGATGTTCTATTATGGATTGAACATAATTTAGATCAGTCTTTACTGCTTGATGATGTGGCGAATAAAG CGGGTTATACCAAGTGGTATTTTCAGCGGCTGTTCAAAAAAGTAACAGGGGTCACACTGGCTAGCTATATTCGTGCTCGT CGTTTGACGAAAGCGGCTGTTGAGTTGAGGTTGACGAAAAAAACTATCCTTGAGATCGCATTAAAATATCAATTTGATTC CCAACAATCTTTTACACGTCGATTTAAGTACATTTTTAAGGTTACACCAAGTTATTATCGGCGTAATAAATTATGGGAAT TGGAGGCAATGCACTGA Protein sequence : MYIEQHSRYQNKANNIQLRYDDKQFHTTVIKDVLLWIEHNLDQSLLLDDVANKAGYTKWYFQRLFKKVTGVTLASYIRAR RLTKAAVELRLTKKTILEIALKYQFDSQQSFTRRFKYIFKVTPSYYRRNKLWELEAMH |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
tetD | AAL08447.1 | putative transcriptional regulator TetD | Not tested | SRL | Protein | 1e-59 | 100 |
tetD | AEA34665.1 | tetracycline resistance protein D | Not tested | Not named | Protein | 1e-59 | 100 |
soxS | YP_219131.1 | DNA-binding transcriptional regulator SoxS | Not tested | SPI-4 | Protein | 6e-21 | 50 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
tetD | YP_002394585.1 | TetD, putative operon control protein | NC_010558.1.6276025. | Protein | 5e-60 | 100 |
tetD | YP_002394585.1 | TetD, putative operon control protein | BAC0371 | Protein | 4e-22 | 51 |
tetD | YP_002394585.1 | TetD, putative operon control protein | CP000034.1.gene4505. | Protein | 8e-22 | 51 |
tetD | YP_002394585.1 | TetD, putative operon control protein | NC_002695.1.914293.p | Protein | 4e-22 | 51 |
tetD | YP_002394585.1 | TetD, putative operon control protein | CP001138.1.gene4488. | Protein | 2e-21 | 50 |
tetD | YP_002394585.1 | TetD, putative operon control protein | CP001138.1.gene612.p | Protein | 8e-22 | 48 |
tetD | YP_002394585.1 | TetD, putative operon control protein | CP001918.1.gene327.p | Protein | 3e-20 | 47 |
tetD | YP_002394585.1 | TetD, putative operon control protein | CP000647.1.gene4499. | Protein | 3e-20 | 47 |
tetD | YP_002394585.1 | TetD, putative operon control protein | CP000647.1.gene1624. | Protein | 1e-21 | 47 |
tetD | YP_002394585.1 | TetD, putative operon control protein | CP001918.1.gene2033. | Protein | 4e-21 | 45 |
tetD | YP_002394585.1 | TetD, putative operon control protein | NC_002695.1.917339.p | Protein | 2e-21 | 43 |
tetD | YP_002394585.1 | TetD, putative operon control protein | BAC0560 | Protein | 2e-21 | 43 |
tetD | YP_002394585.1 | TetD, putative operon control protein | CP001138.1.gene1637. | Protein | 3e-21 | 43 |
tetD | YP_002394585.1 | TetD, putative operon control protein | CP000034.1.gene1596. | Protein | 1e-21 | 43 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
tetD | YP_002394585.1 | TetD, putative operon control protein | VFG1038 | Protein | 4e-60 | 100 |
tetD | YP_002394585.1 | TetD, putative operon control protein | VFG0585 | Protein | 2e-21 | 50 |