Gene Information

Name : pEFER_0013 (pEFER_0013)
Accession : YP_002394561.1
Strain :
Genome accession: NC_011743
Putative virulence/resistance : Unknown
Product : tranposase, ORF B, insertion element IS1
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1662
EC number : -
Position : 7655 - 8158 bp
Length : 504 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; Product type pe : putative enzyme

DNA sequence :
ATGCCGGGCAACCGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGACCGCAGTCGGT
AACCTCACGCATACAACCGGGCAGTGACGTCATTGTCTGCGCGGAAATGGACGAACAGTGGGGCTACGTCGGGGCTAAAT
CACGTCAGCGCTGGTTATTTTACGCCTATGGCAGGATGTGCAGGACGGTGGTGGCACGCGTCTTTGGTGAGCGTACTCTG
GCCACGCTGGAGCGTCTTCCGGGCCTGCTGTCGGCCTTTGAGGTCGTGGTATGGATGACGGATGGCTGGCCGCTTTATGA
ATCCCGCCTGAAGGGAGAACTGCACGTTATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCAGAATCTGAGGC
AGCATCTGGCAAGGCTGGGCAGGAAGTCACTGTCGTTCTCAAAATCGGTGGCGCTGCATGACAAAGTCATCGGGCATTAT
CTGAACATAAAACACTATCAGTAA

Protein sequence :
MPGNRPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYGRMCRTVVARVFGERTL
ATLERLPGLLSAFEVVVWMTDGWPLYESRLKGELHVISKRYTQRIERHNQNLRQHLARLGRKSLSFSKSVALHDKVIGHY
LNIKHYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 3e-71 93
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 1e-68 92
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 1e-68 92
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 5e-53 91
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 7e-68 90
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 5e-68 90
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 2e-70 90
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 2e-70 90
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 2e-70 90
aec38 AAW51721.1 InsB Not tested AGI-3 Protein 3e-53 90
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 6e-66 89
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 9e-68 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pEFER_0013 YP_002394561.1 tranposase, ORF B, insertion element IS1 VFG0612 Protein 2e-66 89