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Name : ibrA (ECS88_0643) Accession : YP_002390456.1 Strain : Escherichia coli S88 Genome accession: NC_011742 Putative virulence/resistance : Virulence Product : immunoglobulin-binding regulator Function : - COG functional category : R : General function prediction only COG ID : COG3969 EC number : - Position : 659244 - 660464 bp Length : 1221 bp Strand : - Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 12057959; Product type r : regulator DNA sequence : ATGTCTATTTATAAAATCCCGCTTCCACTGAATATTCTGGAAGCTGCAAAAGAACGTATTACCTGGACACTTAATACCCT ACCCCGTATCTGTGTTTCTTTTTCGGGTGGTAAAGATTCCGGATTAATGCTGCATCTGACAGCTGAAATTGCCCGACAAA TGGGCAAAAAAATCTGCGTTTTGTTTATCGACTGGGAAGCGCAGTTCTCATGCACTATTAACTATGTTCAGTCATTACGT GAGTTTTACGCCGATGTCATCGAAGAGTTTTACTGGGTTGCGCTCCCGCTTACGACGCAAAATTCCCTTTCTCAATACCA ACCCGAATGGCAGTGCTGGGAACCTGATGTCGAATGGGTGCGTCAGCCCCCGCAAGATGCGATAACCGATCCTGACTTTT TCTCCTTTTACCAGCCTGGTATGACCTTCGAACAATTTGTGCGTGAGTTTGCCGAATGGTTTTCGCAAAAGCGTCCGGCG GCGATGATGATCGGCATCCGTGCAGATGAGTCCTACAACCGTTTTGTCGCCATCGCCAGTTTAAATAAACAACGTTTTGC CGATGATAAGCCCTGGACCACCGCCGCACCAGGCGGTCATAGCTGGTACATTTACCCCATCTACGACTGGAAAGTGGCTG ATATCTGGACCTGGTATGCTAACCATCAACAGCTCTGTAACCCACTGTATAATATAATGTATCAGGCAGGCGTTCCTCTG CGTCATATGCGAATTTGCGAACCTTTTGGCCCGGAGCAACGGCAAGGATTATGGCTCTATCACGTTATCGAACCGGATCG CTGGGCTGCTATGTGCGCACGAGTCAGCGGGGTAAAAAGTGGCGGCATTTACGCCGGACATGATAATCATTTTTATGGTC ATCGGAAAATCCTCAAGCCAGAACATTTAGACTGGCAAGAATATGCATTATTGCTGCTCAATAGCATGCCGGAAAAAACA GCTGAGCATTACCGCAATAAAATCGCCATTTATTTGCACTGGTATCAGAAAAAAGGCATCGAAGTTCCACAAACCCAGCA AGGGGACATTGGCGCGAAAGATATCCCCTCCTGGCGGCGAATATGCAAAGTTTTACTCAATAACGATTACTGGTGCCGGG CATTATCATTTAGTCCTACGAAAGCGAAGAACTATCAGCGTTATAACGAACGGATAAAAGGAAAACGTCAGGAATGGGGG ATACTATGCAACAACGATTAA Protein sequence : MSIYKIPLPLNILEAAKERITWTLNTLPRICVSFSGGKDSGLMLHLTAEIARQMGKKICVLFIDWEAQFSCTINYVQSLR EFYADVIEEFYWVALPLTTQNSLSQYQPEWQCWEPDVEWVRQPPQDAITDPDFFSFYQPGMTFEQFVREFAEWFSQKRPA AMMIGIRADESYNRFVAIASLNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTWYANHQQLCNPLYNIMYQAGVPL RHMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVSGVKSGGIYAGHDNHFYGHRKILKPEHLDWQEYALLLLNSMPEKT AEHYRNKIAIYLHWYQKKGIEVPQTQQGDIGAKDIPSWRRICKVLLNNDYWCRALSFSPTKAKNYQRYNERIKGKRQEWG ILCNND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ibrA | ADD91735.1 | putative phosphoadenosine phosphosulfate reductase IbrA | Not tested | PAI-I AL862 | Protein | 1e-123 | 59 |
| Z1643 | AAQ19139.1 | putative phosphoadenosine phosphosulfate reductase | Not tested | PAI I CL3 | Protein | 4e-124 | 59 |
| z1203 | CAD33763.1 | Z1203 protein | Not tested | PAI I 536 | Protein | 1e-124 | 59 |
| APECO1_3502 | YP_854308.1 | hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 7e-125 | 58 |
| c5209 | NP_757057.1 | hypothetical protein | Not tested | PAI II CFT073 | Protein | 7e-125 | 58 |
| Z1203 | NP_286738.1 | hypothetical protein | Not tested | TAI | Protein | 1e-123 | 58 |
| ORF_31 | AAZ04441.1 | conserved hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 5e-125 | 58 |
| Z1643 | NP_287146.1 | hypothetical protein | Not tested | TAI | Protein | 1e-123 | 58 |
| t4277 | NP_807875.1 | hypothetical protein | Not tested | SPI-7 | Protein | 9e-125 | 58 |
| STY4583 | NP_458667.1 | conserved hypothetical protein | Not tested | SPI-7 | Protein | 2e-124 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ibrA | YP_002390456.1 | immunoglobulin-binding regulator | VFG1504 | Protein | 5e-125 | 59 |
