Gene Information

Name : ECS88_4887 (ECS88_4887)
Accession : YP_002394361.1
Strain : Escherichia coli S88
Genome accession: NC_011742
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4844207 - 4844824 bp
Length : 618 bp
Strand : +
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence : 
GTGAGGAATATGAAAATGAAACAACAGTATCAGACCCGCTACGAATGGCTCCACGAAAGCTACCAGAAATGGCTGACCGG
CTTCACCCGGCACGCCGTATCCTGGGGCGTGTGTCATCCGAATATCTACTACTTCCATAATCTGACGCCCGGGTGGGTGT
CATTCAATGGTGAAAAACCGGAGATTGCCATCGTACCCCAGAGCCTGCACCGGCTGATTTATGGCCCTGACAAACGGGCC
ACGCCGCCCCTGGATGATGATCTGATCGTGAATTTATGCACCAGTGAACATCTGCTGGTTCATCATCCGATGCTGGAAGG
CATTCTCCTGTCTGAATGTGAACGTCTGAGGCAGCGTTCTCTGGCAAATAAACTGATTAGCCTCTTCCGTCAGTTTGGTG
GCACGGAGTTGCGCCTCAAACTGGTCTGGCTTTGCTGGCTTGATTTAATGACCGGAAACAGCCTTGAAGACTGGAAAGAG
AACCTGAAACGGAAATCAGAAAAAGAGCTGGAGGAATGGATCATCAACCGTCAGAGGCAGAGCACAGCACTGACGGATCT
GATGGATCAGTACGTGCTCCTGGCATACCGCACAACGGTTGACGATAACCGCAACTGA

Protein sequence : 
MRNMKMKQQYQTRYEWLHESYQKWLTGFTRHAVSWGVCHPNIYYFHNLTPGWVSFNGEKPEIAIVPQSLHRLIYGPDKRA
TPPLDDDLIVNLCTSEHLLVHHPMLEGILLSECERLRQRSLANKLISLFRQFGGTELRLKLVWLCWLDLMTGNSLEDWKE
NLKRKSEKELEEWIINRQRQSTALTDLMDQYVLLAYRTTVDDNRN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08467.1 unknown Not tested SRL Protein 2e-92 99
aec62 AAW51745.1 Aec62 Not tested AGI-3 Protein 6e-74 95
unnamed ADD91711.1 putative acyl-CoA dehydrogenase Not tested PAI-I AL862 Protein 2e-88 95
ECO103_3578 YP_003223439.1 hypothetical protein Not tested LEE Protein 1e-89 95
unnamed CAI43836.1 hypothetical protein Not tested LEE Protein 5e-92 95
unnamed CAE85188.1 hypothetical protein Not tested PAI V 536 Protein 4e-88 94
APECO1_1087 YP_853107.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 6e-87 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECS88_4887 YP_002394361.1 hypothetical protein VFG1058 Protein 8e-93 99