Gene Information

Name : ECS88_4879 (ECS88_4879)
Accession : YP_002394354.1
Strain : Escherichia coli S88
Genome accession: NC_011742
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4840640 - 4841161 bp
Length : 522 bp
Strand : -
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
ATGTCACCACGATTATTATGGGGAGCAGTACTGCACACACTGCCAGACCGGAGGATTCAGTATTCCCCGGACAACTCAGG
AGGAAATATGCGAATTCTGAACTGTTATATGGCGAATGACAGCAAAGGCCATTTTGTTACGGCGAAAGAAGCTGCGAAGC
ACAACCGACAGGACGTTTTGTGCTGTGTGTCCTGTGGATGCCCGTTAACACTTCAGCGGGGCAATGACGGACAACCACCG
TGGTTTGAACATGACCAGATGACTGTCGCTGAAAAAATCCTGCTGCGATGTACCTGGCTTGACCCGGCAGAGAAAGAGGC
CCGTCGTTTGCATCTGCAGGGCATGACGGTTCCGGATTATACGGTGAAGGTGAGAAAGTGGTTTTGTGTGATGTGTGACG
AAGATTATGAGGGGGAAAAGTGCTGCCCACGCTGCGGTACCGGGGTATACAGCAGGGCGTGGGGGCGGCAGGAGGTGCCG
TCGGAAGATGCCAGGGCTGATAATCCGTTACAGAGGCTGTAA

Protein sequence :
MSPRLLWGAVLHTLPDRRIQYSPDNSGGNMRILNCYMANDSKGHFVTAKEAAKHNRQDVLCCVSCGCPLTLQRGNDGQPP
WFEHDQMTVAEKILLRCTWLDPAEKEARRLHLQGMTVPDYTVKVRKWFCVMCDEDYEGEKCCPRCGTGVYSRAWGRQEVP
SEDARADNPLQRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08463.1 unknown Not tested SRL Protein 4e-79 100
APECO1_1082 YP_853102.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 3e-69 99
unnamed ADD91716.1 hypothetical protein Not tested PAI-I AL862 Protein 1e-63 98
unnamed CAI43832.1 hypothetical protein Not tested LEE Protein 4e-77 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECS88_4879 YP_002394354.1 hypothetical protein VFG1054 Protein 2e-79 100