|
Name : ECS88_4702 (ECS88_4702) Accession : YP_002394192.1 Strain : Escherichia coli S88 Genome accession: NC_011742 Putative virulence/resistance : Unknown Product : Transposase insF for insertion sequence IS3A/B/C/D/E/fA Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 4669573 - 4670385 bp Length : 813 bp Strand : - Note : Evidence 2b : Function of strongly homologous gene; Product type pe : enzyme DNA sequence : GTGCTGGATGTTCATCCCAGTGGTTTTTACGCCTGGCTTCAGCAGCCGCATTCACAACGCCATCAGGCAGACCTGAGACT GACAGGACAGATTAAACAGTTCTGGCTGGAATCGGGATGCGTCTATGGTTATCGCAAAATCCATCTGGATCTGCGTGACA GCGGGCAACAGTGCGGAGTAAACAGAGTCTGGAGACTGATGAAACGTGTCGGAATAAAGGCTCAGGTCGGATACCGAAGC CCGCGGGCACGTAAAGGCGAGGCCAGTATCATGTCACCCAACAGGCTCCAGCGACAGTTCAATCCGGATGCTCCTGATGA GCGTTGGGTAACGGACATAACCTACATCAGGACCCACGAAGGCTGGCTGTATCTTGCCGTTGTTGTTGATCTGTTCTCAC GCAAAATTATCGGCTGGTCCATGCAATCCCGGATGACAAAGGACATTGTCCTGAACGCACTGCTGATGGCTGTATGGCGG CGTAATCCCGAAAAACAGGTGCTGGTTCATTCGGATCAGGGCAGTCAGTACACAAGCCATGAGTGGCAGTCGTTCCTGAA ATCACACGGCCTGGAGGGTAGCATGAGCCGTCGCGGTAACTGCCATGATAATGCGGTTGCAGAAAGTTTTTTCCAGTTGT TGAAACGTGAACGGATAAAGAAAAAGATCTACGGAATGCGGGAAGAAGCCCGCAGTGATATTTTTGATTACATCGAAATG TTTTATAACAGTAAGCGTCGGCATGGTTCTAGCGAACAGATGTCACCGACAGAATATGAAAACCAGTATTATCAACGGCT CGGAAGTGTCTAG Protein sequence : MLDVHPSGFYAWLQQPHSQRHQADLRLTGQIKQFWLESGCVYGYRKIHLDLRDSGQQCGVNRVWRLMKRVGIKAQVGYRS PRARKGEASIMSPNRLQRQFNPDAPDERWVTDITYIRTHEGWLYLAVVVDLFSRKIIGWSMQSRMTKDIVLNALLMAVWR RNPEKQVLVHSDQGSQYTSHEWQSFLKSHGLEGSMSRRGNCHDNAVAESFFQLLKRERIKKKIYGMREEARSDIFDYIEM FYNSKRRHGSSEQMSPTEYENQYYQRLGSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL57581.1 | transposase 1 | Not tested | LEE | Protein | 4e-40 | 45 |
| unnamed | AAL57519.1 | transposase 1 | Not tested | LEE | Protein | 2e-40 | 45 |
| trp1329B | CAB46576.1 | IS1329 transposase B | Not tested | HPI | Protein | 2e-42 | 44 |
| tnpB | CAB61574.1 | transposase B | Not tested | HPI | Protein | 3e-43 | 44 |
| ECO111_3732 | YP_003236068.1 | putative IS3 transposase InsF | Not tested | LEE | Protein | 2e-39 | 44 |
| unnamed | AAC31485.1 | L0006 | Not tested | LEE | Protein | 2e-28 | 42 |
| ECs4537 | NP_312564.1 | hypothetical protein | Not tested | LEE | Protein | 2e-28 | 42 |
| l7094 | CAD33743.1 | ORF B protein | Not tested | PAI I 536 | Protein | 5e-29 | 42 |
| orfB | CAE85178.1 | OrfB protein, IS911 | Not tested | PAI V 536 | Protein | 5e-29 | 42 |
| unnamed | ACU09432.1 | IS911 transposase orfB | Not tested | LEE | Protein | 2e-28 | 42 |
| unnamed | CAI43898.1 | putative transposase | Not tested | LEE | Protein | 2e-29 | 42 |
| aec65 | AAW51748.1 | Aec65 | Not tested | AGI-3 | Protein | 2e-29 | 42 |
| Z5089 | NP_290241.1 | transposase | Not tested | LEE | Protein | 3e-28 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECS88_4702 | YP_002394192.1 | Transposase insF for insertion sequence IS3A/B/C/D/E/fA | VFG1484 | Protein | 3e-29 | 42 |
| ECS88_4702 | YP_002394192.1 | Transposase insF for insertion sequence IS3A/B/C/D/E/fA | VFG0785 | Protein | 1e-28 | 42 |
