Gene Information

Name : ECS88_4650 (ECS88_4650)
Accession : YP_002394147.1
Strain : Escherichia coli S88
Genome accession: NC_011742
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3596
EC number : -
Position : 4628089 - 4628973 bp
Length : 885 bp
Strand : -
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence : 
ATGCCATTCAGCAATTCTTCCCTCTCCGCGCAAGTGAAATCATATCTGACGTTTCTTCCTGAAGAAATTCGCCAGAAAAT
CCTTGAACATCTCCACGGTGTTATTCATTACGAGCCCGTGATTGGCATTATGGGTAAATCCGGCACCGGCAAAAGCAGTC
TGTGTAATGCCATTTTTCAGTCCCGTATCTGCGCCACGCATCCCCTGAACGGCTGCACCCGCCAGGCTCATCGCCTCACC
CTGCAGATTGGTGAACGCAGAATGACGCTGGTCGATCTGCCCGGCATTGGTGAGACACCGCAGCATGATCAGGAATACCG
GGAGATTTACCGTCAGTTACTGCCGGAACTGGATCTGATTATCTGGATCCTGCGGGCTGATGAACGTGCGTATGCTGCCG
ATATTGCCATGCATCAGTTTTTACTGAATGAAGGTGCAGATCCCTCGCGTTTTCTGTTTGTTCTCAGCCATGCCGATCGC
GTGTTTCCTGCTGAAGAATGGAATGCCACAGAAAAATGCCCATCCCGTCACCAGGAACTCTCACTGGCAACTGTTACAGC
CAGGGTGGCAACCCTGTTCCCGTCATCATTTCCGGTACTCCCCGTTGCTGCGCCTGTCGGCTGGAATCTTCCGGCGTTTG
TGTCGCTGATGATCCACGCCCTGCCACCGCAGGCAACCAGTGCGGTTTATTCACATATCCGGGGGGAAAACCGCTCTGAA
CAGGCCCAGAAACACGCACAACAGACTTTTGGTGACGCCATCGGGAAAAGTTTTGACGACGCCGTTGCCCGGTTCACTTT
TCCGGTCTGGATGTTACAGCTTCTGCGTAAAGCCCGGGACCGCATTATCCGCCTGCTGGAAACACTGTGGGATCGTCTGT
TCTGA

Protein sequence : 
MPFSNSSLSAQVKSYLTFLPEEIRQKILEHLHGVIHYEPVIGIMGKSGTGKSSLCNAIFQSRICATHPLNGCTRQAHRLT
LQIGERRMTLVDLPGIGETPQHDQEYREIYRQLLPELDLIIWILRADERAYAADIAMHQFLLNEGADPSRFLFVLSHADR
VFPAEEWNATEKCPSRHQELSLATVTARVATLFPSSFPVLPVAAPVGWNLPAFVSLMIHALPPQATSAVYSHIRGENRSE
QAQKHAQQTFGDAIGKSFDDAVARFTFPVWMLQLLRKARDRIIRLLETLWDRLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33781.1 hypothetical protein Not tested PAI I 536 Protein 1e-135 97
unnamed CAD42093.1 hypothetical protein Not tested PAI II 536 Protein 3e-132 95
APECO1_3493 YP_854318.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-133 94
c5162 NP_757010.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-133 94
unnamed AAL67395.1 unknown Not tested PAI II CFT073 Protein 3e-133 94
ORF_43 AAZ04452.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-133 94

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECS88_4650 YP_002394147.1 hypothetical protein VFG1522 Protein 7e-136 97
ECS88_4650 YP_002394147.1 hypothetical protein VFG1612 Protein 2e-132 95