Gene Information

Name : ECS88_4648 (ECS88_4648)
Accession : YP_002394145.1
Strain : Escherichia coli S88
Genome accession: NC_011742
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4626378 - 4627163 bp
Length : 786 bp
Strand : -
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence : 
ATGTTGAACAGAAAACTAAATATATGGCTATTACGTCATTTCCTGAACAGTCACTGCATACCTTCCATCATTATCAATAA
CACCGTACGTTCATTTCAGAGGTCAGTCATGAATACCAGAACTCTTTTTCCCCTGCTTTTCACTGTTGCATCCTTCTCCG
CCTCCGCCGGTAACTGGGCTGTCAAAAACGGCTGGTGCCAGACCATGACGGAAGATGGTCAGGCGCTGGTAATGCTGAAA
AATGGCACGATTGGTATTACCGGCCTGATGCAGGGATGCCCGAATGGCGTACAGACGCTCCTGGGCAGCCGTATCAGTAT
TAACGGTAACCTGATCCCCACATCACAAATGTGTAATCAGCAGACGGGATTCAGGGCTGTTGAGGTGGAAGCCGAACAGG
CGTCGGAAATGGTCAAAAAAGCCGTTCACTCCATAGCAGAGCGTGATGTGTCCGTTTTACAGGCATTTGGTGTACGAATG
GAATTCACCCGCGGTGATATGCTGAAGGTCTGTCCGAAATTTGTCACATCACTTGCCGTTTTTTCCCCGAAACAGACGAC
CACTATTAATAAAGACTCCGTACTGCAGGCTGCCCGACAGGCATACGCCCGGAAATACGACGAGGAAACAACAGAAACCG
CTGATTTTGGCTCTTACGAAGTAAAAGGCAATAAGGTTGAGTTTGAAGTATTCAATCCTGAAGACCGTGCGTACGACAAA
GTGACCGTCACGGTTGGTGCTGACGGTAATGCCACCGGCGCCAGCGTTGAATTTATCGGAAAATAG

Protein sequence : 
MLNRKLNIWLLRHFLNSHCIPSIIINNTVRSFQRSVMNTRTLFPLLFTVASFSASAGNWAVKNGWCQTMTEDGQALVMLK
NGTIGITGLMQGCPNGVQTLLGSRISINGNLIPTSQMCNQQTGFRAVEVEAEQASEMVKKAVHSIAERDVSVLQAFGVRM
EFTRGDMLKVCPKFVTSLAVFSPKQTTTINKDSVLQAARQAYARKYDEETTETADFGSYEVKGNKVEFEVFNPEDRAYDK
VTVTVGADGNATGASVEFIGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33783.1 hypothetical protein Not tested PAI I 536 Protein 2e-114 97
ORF_45 AAZ04454.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-114 97
unnamed CAD42095.1 hypothetical protein Not tested PAI II 536 Protein 7e-115 97
APECO1_3491 YP_854320.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-114 97
c5158 NP_757006.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-114 96
unnamed AAL67392.1 putative intergenic-region protein Not tested PAI II CFT073 Protein 6e-70 79

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECS88_4648 YP_002394145.1 hypothetical protein VFG1614 Protein 4e-115 97
ECS88_4648 YP_002394145.1 hypothetical protein VFG1524 Protein 1e-114 97