Gene Information

Name : gspG (ECS88_3716)
Accession : YP_002393302.1
Strain : Escherichia coli S88
Genome accession: NC_011742
Putative virulence/resistance : Virulence
Product : pseudopilin, cryptic, general secretion pathway
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 3666538 - 3666975 bp
Length : 438 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 95204361, 96256608; Product type t : transporter

DNA sequence : 
ATGCGCGCAACGGATAAGCAACGCGGTTTTACATTACTGGAAATTATGGTGGTAATTGTCATCATTGGCGTACTCGCCAG
CCTGGTGGTTCCCAACCTGATGGGCAATAAAGAAAAGGCGGATAAACAAAAAGCCGTCAGCGATATTGTGGCGCTGGAAA
ACGCCCTGGATATGTACAAGCTCGACAATCATCGCTATCCAACCACAAATCAGGGGCTTGAATCCTTAGTAGAAGCGCCG
ACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCGATCCCTGGGGCAATGATTA
TGTCCTCGTTAATCCTGGTGAGCATGGTGCATACGATCTGCTTTCAGCAGGACCCGATGGTGAAATGGGAACCGAGGACG
ACATCACCAACTGGGGTTTGAGCAAGAAGAAAAAGTAA

Protein sequence : 
MRATDKQRGFTLLEIMVVIVIIGVLASLVVPNLMGNKEKADKQKAVSDIVALENALDMYKLDNHRYPTTNQGLESLVEAP
TLPPLAANYNKEGYIKRLPADPWGNDYVLVNPGEHGAYDLLSAGPDGEMGTEDDITNWGLSKKKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 4e-39 65
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-39 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG YP_002393302.1 pseudopilin, cryptic, general secretion pathway VFG2050 Protein 1e-39 65
gspG YP_002393302.1 pseudopilin, cryptic, general secretion pathway VFG0180 Protein 1e-30 55
gspG YP_002393302.1 pseudopilin, cryptic, general secretion pathway VFG1871 Protein 2e-30 52