Gene Information

Name : yghO (ECS88_3356)
Accession : YP_002392963.1
Strain : Escherichia coli S88
Genome accession: NC_011742
Putative virulence/resistance : Unknown
Product : DNA-binding transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3320362 - 3321504 bp
Length : 1143 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : regulator

DNA sequence :
ATGGAATGCGATCTGCTGATGATTAAAATTGAAAAAGTAATTAATAAAAAAGACCTTAAGGCATTTATCGCTTTTCCGTC
ATCACTTTATCCCGATGATCCAAACTGGATACCCCCTTTATTCATTGAACGCAGCGAGCATTTGTCTGCGAAGAATCCGG
GGACGGACCATATCATCTGGCAGGCGTGGGTAGCAAAAAAAGCCGGGCAGATAGTCGGGCGGATTACCGCGCAAATCGAT
ACCTTGCACCGTGAGCGTTACGGTGAAGATACCGGTCATTTCGGCATGATTGACTCCATTGATGATCCGCAGGTTTTTGC
CGCGTTGTTTGGTACAGCGGAAGCGTGGTTGAAGTCACAAGGTGCAAGTAAGATCAGCGGGCCTTTCAGCCTGAATATCA
ATCAGGAAAGCGGATTACTGATTGAAGGTTTTGACACTCCGCCCTGTGCGATGATGCCACACGGCAAACCGTGGTATGCC
GCGCATATTGAACAACTGGGTTATCACAAAGGCATTGATTTACTGGCGTGGTGGATGCAGCGAACCGATCTCACTTTCTC
TCCGGCGCTAAAAAAACTGATGGATCAGGTGCGCAAAAAAGTGACCATTCGCTGCATCAATCGCCAGCGGTTTGCCGAAG
ATATGCAGATCCTGCGTGAGATTTTCAATTCTGGCTGGCAGCACAACTGGGGATTTGTGCCGTTTACCGAACATGAATTC
GCGACCATGGGCGATCAACTTAAATATCTGGTGCCGGACGATATGATCTACATCGCTGAGATTGATTCTGCACCCTGCGC
GTTTATTGTTGGCTTGCCGAACATCAACGAGGCGATTGTCGATCTGAACGGATCGCTCTTTCCCTTCGGCTGGGCAAAAT
TGCTGTGGCGTTTGAAAGTCAGCGGTGTGCGAACTGCGCGAGTGCCGCTGATGGGCGTGCGGGACGAGTATCAGTTCAGC
CGCATCGGCCCGGTGATTGCGCTGTTATTGATTGAAGCCTTACACGATCCGTTTGCCCGCCGGAAGATCGATGCGCTGGA
AATGTCATGGATCCTCGAAACCAATACAGGCATGAATAACATGCTGGAACGCATTGGGGCGGAGCCGTACAAGCGTTACC
GATTGTATGAAAAGCAGATTTGA

Protein sequence :
MECDLLMIKIEKVINKKDLKAFIAFPSSLYPDDPNWIPPLFIERSEHLSAKNPGTDHIIWQAWVAKKAGQIVGRITAQID
TLHRERYGEDTGHFGMIDSIDDPQVFAALFGTAEAWLKSQGASKISGPFSLNINQESGLLIEGFDTPPCAMMPHGKPWYA
AHIEQLGYHKGIDLLAWWMQRTDLTFSPALKKLMDQVRKKVTIRCINRQRFAEDMQILREIFNSGWQHNWGFVPFTEHEF
ATMGDQLKYLVPDDMIYIAEIDSAPCAFIVGLPNINEAIVDLNGSLFPFGWAKLLWRLKVSGVRTARVPLMGVRDEYQFS
RIGPVIALLLIEALHDPFARRKIDALEMSWILETNTGMNNMLERIGAEPYKRYRLYEKQI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yghO CAE85247.1 YghO protein Not tested PAI V 536 Protein 3e-178 98