|
Name : yghE (ECS88_3336) Accession : YP_002392943.1 Strain : Escherichia coli S88 Genome accession: NC_011742 Putative virulence/resistance : Virulence Product : GspL-like protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3297 EC number : - Position : 3294479 - 3295657 bp Length : 1179 bp Strand : - Note : similar to general secretory pathway protein L DNA sequence : GTGAGTTCCATGCTTGAGATTTTTTTCCCGCTTTGCGCCGCTGATCCCATCCGTTGGCAGCGCCATACACCCGACGTGGA GCACGGTATCTGGCCTGACGTTGCTGACGAACGTCTCCAGCAATGGCTGCAAACTGATGCGATTCGACTCTACATTCCTG GCGAATGGATCAGCGTCTGGCAGGTTGAACTGCCTGATGTGCCCCGCAAGCAGATACCGACGATTCTGCCCGCCTTGCTG GAAGAAGAGCTGAACCAGGATATCGATGAACTGCATTTCGCCCCGTTGAAAATCGACCAGCAACTGGCAACCGTAGCTGT GATTCACCAGCAGCATATGCGCAACATTGCGCAGTGGTTGCAGGCAAACGGCATCACCCGCGCTACCGTCGCGCCGGACT GGATGTCCATTCCTTGTGGGTTTATGGCTGGCGATGCGCAACGGGTTATCTGCCGCATCGATGAATGCCGGGGATGGAGC GCCGGGCGGGCGCTGGCTCCGGTCATGTTCCGCGCACAGCTCAATGAGCAGAATTTACCGATTTCACTAACTGTGGTCGG CATTGCACCGGAAGAACTGTCTGCATGGGCTGGTGCGGACGCCGAACGCCTGACCGTTACGGCTCTGCCCGCCATTACCA CTTATGGCGAATCGGAAGGGAACCTGCTAACAGGGCCGTGGCAGCCTCGTGTCAGCTACCGAAAACAGTGGGCGCGCTGG CGGGTGATGATTCTGCCGATATTGCTGATTCTGGTTGCGCTGGTAGTGGAACGGGGCGTGACGTTATGGAGCGTCAGCGA ACAGGTGGCGCAAAGCCGCACCCAGGCGGAAAAAAAGTTCTTAACACTGTTCCCGGAGCAGAAGCGGATTGTGAATTTGC GTTCCCAGGTGACGATGGCGCTGAAAAAATATCGCCCGCAGGCCGATGATACCCGGCTGCTCGCCGAGTTGTCAGCGATA GCCAGCACCCTGAAATCAGCATCACTTTCCGACATCGAAATGCGTGGTTTCACCTTTGATCAAAAACGCCAGACGCTCCA CCTTCAGTTGCGGGCCGCGAACTTTGCCAGTTTCGACAAACTGCGTAGCGCACTGGCGGCAGATTATGTTGTGCAACAGG ACGCGTTACAGAAAGAGGGTGATGCGGTTTCCGGCGGCGTAACGTTGCGGAGGAAATAA Protein sequence : MSSMLEIFFPLCAADPIRWQRHTPDVEHGIWPDVADERLQQWLQTDAIRLYIPGEWISVWQVELPDVPRKQIPTILPALL EEELNQDIDELHFAPLKIDQQLATVAVIHQQHMRNIAQWLQANGITRATVAPDWMSIPCGFMAGDAQRVICRIDECRGWS AGRALAPVMFRAQLNEQNLPISLTVVGIAPEELSAWAGADAERLTVTALPAITTYGESEGNLLTGPWQPRVSYRKQWARW RVMILPILLILVALVVERGVTLWSVSEQVAQSRTQAEKKFLTLFPEQKRIVNLRSQVTMALKKYRPQADDTRLLAELSAI ASTLKSASLSDIEMRGFTFDQKRQTLHLQLRAANFASFDKLRSALAADYVVQQDALQKEGDAVSGGVTLRRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspL | YP_854399.2 | GspL-like protein | Not tested | PAI I APEC-O1 | Protein | 7e-122 | 99 |
| gspL | CAE85226.1 | GspL, hypotehtical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-166 | 97 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yghE | YP_002392943.1 | GspL-like protein | VFG2055 | Protein | 9e-119 | 96 |
