Gene Information

Name : kpsM (ECS88_3333)
Accession : YP_002392941.1
Strain : Escherichia coli S88
Genome accession: NC_011742
Putative virulence/resistance : Virulence
Product : Polysialic acid transport protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1682
EC number : -
Position : 3292107 - 3292943 bp
Length : 837 bp
Strand : -
Note : Evidence 1b : Function experimentally demonstrated in the studied species; PubMedId : 1856162, 7715449; Product type t : transporter

DNA sequence : 
TTGGTAGCTGTTAAGCCAAGGGCGGTAGCGTACCTGAAGAGATTAGGATCACATCATCAAATGGCAAGAAGTGGATTTGA
AGTTCAGAAAGTCACCGTAGAGGCATTATTTCTACGAGAAATACGAACACGCTTTGGTAAGTTTCGTCTGGGGTATTTGT
GGGCGATTCTTGAACCCTCCGCGCATTTGCTGATACTGTTGGGAATTTTGGGTTACGTTATGCACCGCACTATGCCAGAC
ATCTCGTTCCCGGTGTTTTTACTTAATGGCCTGATTCCCTTTTTTATCTTTAGTAGTATTAGCAAACGTTCTATTGGTGC
TATTGAAGCGAACCAGGGACTGTTTAATTATCGACCAGTAAAACCCATCGATACGATCATTGCACGTGCACTGCTTGAGA
CACTGATTTACGTTGCTGTTTATATTTTGCTCATGCTTATCGTCTGGATGACAGGCGAATATTTCGAAATTACAAACTTT
TTACAACTTGTGCTCACCTGGAGTTTGTTAATCATTCTTTCATGTGGCGTCGGCTTAATATTTATGGTCGTTGGTAAAAC
CTTTCCTGAAATGCAAAAGGTCCTGCCGATACTGCTTAAGCCGCTGTATTTCATCTCCTGCATCATGTTCCCTCTACACT
CGATTCCAAAACAATACTGGTCATATCTACTCTGGAACCCATTAGTGCATGTTGTGGAGTTAAGCCGCGAGGCAGTTATG
CCTGGCTATATCAGTGAAGGCGTGAGTCTGAACTACCTTGCAATGTTTACTCTGGTCACCCTGTTCATCGGCCTGGCATT
ATACCGAACGCGTGAAGAGGCAATGCTGACATCATGA

Protein sequence : 
MVAVKPRAVAYLKRLGSHHQMARSGFEVQKVTVEALFLREIRTRFGKFRLGYLWAILEPSAHLLILLGILGYVMHRTMPD
ISFPVFLLNGLIPFFIFSSISKRSIGAIEANQGLFNYRPVKPIDTIIARALLETLIYVAVYILLMLIVWMTGEYFEITNF
LQLVLTWSLLIILSCGVGLIFMVVGKTFPEMQKVLPILLKPLYFISCIMFPLHSIPKQYWSYLLWNPLVHVVELSREAVM
PGYISEGVSLNYLAMFTLVTLFIGLALYRTREEAMLTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsM YP_854397.1 polysialic acid transport protein KpsM Not tested PAI I APEC-O1 Protein 9e-109 100
kpsM CAE85224.1 KpsM protein Virulence PAI V 536 Protein 3e-81 73

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kpsM YP_002392941.1 Polysialic acid transport protein VFG1450 Protein 4e-109 100