Gene Information

Name : kpsT (ECS88_3332)
Accession : YP_002392940.1
Strain : Escherichia coli S88
Genome accession: NC_011742
Putative virulence/resistance : Virulence
Product : Polysialic acid transport ATP-binding protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : 3.6.3.38
Position : 3291451 - 3292110 bp
Length : 660 bp
Strand : -
Note : Evidence 1b : Function experimentally demonstrated in the studied species; PubMedId : 1856162, 8051103, 2082146; Product type t : transporter

DNA sequence : 
ATGATTAAGATTGAGAATTTGACGAAGTCTTATCGCACGCCCACTGGGCGGCATTATGTTTTTAAAAATTTGAATATTAT
TTTTCCTAAAGGCTATAACATTGCCCTGATTGGTCAAAATGGAGCCGGTAAATCAACTTTACTTCGGATAATTGGTGGTA
TAGATCGTCCTGATAGTGGGAACATTATTACAGAACATAAAATTTCATGGCCCGTTGGATTGGCTGGTGGATTTCAAGGA
AGTTTAACCGGTCGTGAAAATGTTAAATTTGTTGCCCGACTATATGCAAAACGCGATGAGTTAAATGAGAGGGTTGATTT
TGTTGAAGAGTTTTCCGAACTCGGAAAATATTTCGATATGCCCATTAAAACTTATTCTTCTGGCATGAGGTCAAGGTTAG
CTTTTGGATTAAGTATGGCTTTTAAATTCGACTATTATCTTATTGATGAAATCACTGCTGTTGGAGACGCAAAGTTTAAA
AAGAAATGTTCAGATATATTCGATAAAATAAGAGAAAAATCTCATTTAATAATGGTGTCACATAGTGAACGAGCTTTAAA
GGAGTATTGTGATGTTGCTATTTATCTTAACAAAGAGGGGCAAGGTAAATTTTATAAAAATGTTACGGAAGCCATTGCTG
ATTACAAAAAAGACCTATAG

Protein sequence : 
MIKIENLTKSYRTPTGRHYVFKNLNIIFPKGYNIALIGQNGAGKSTLLRIIGGIDRPDSGNIITEHKISWPVGLAGGFQG
SLTGRENVKFVARLYAKRDELNERVDFVEEFSELGKYFDMPIKTYSSGMRSRLAFGLSMAFKFDYYLIDEITAVGDAKFK
KKCSDIFDKIREKSHLIMVSHSERALKEYCDVAIYLNKEGQGKFYKNVTEAIADYKKDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 4e-100 100
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 1e-75 72
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 9e-44 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kpsT YP_002392940.1 Polysialic acid transport ATP-binding protein VFG1449 Protein 1e-100 100
kpsT YP_002392940.1 Polysialic acid transport ATP-binding protein VFG0696 Protein 1e-45 48
kpsT YP_002392940.1 Polysialic acid transport ATP-binding protein VFG0258 Protein 3e-44 48
kpsT YP_002392940.1 Polysialic acid transport ATP-binding protein VFG2563 Protein 3e-42 43