Gene Information

Name : yeeU (ECS88_3314)
Accession : YP_002392923.1
Strain : Escherichia coli S88
Genome accession: NC_011742
Putative virulence/resistance : Virulence
Product : antitoxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3271478 - 3271855 bp
Length : 378 bp
Strand : +
Note : Evidence 1b : Function experimentally demonstrated in the studied species; PubMedId : 14594833; Product type h : extrachromosomal origin

DNA sequence :
GTGTCAGACACACTGCCCGGGACAACGCATCCCGACGACAATCACGACCGCCCCTGGTGGGGGCTGCCCTGCACCGTGAC
GCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGTGCCGGTATCAGAGGCCGGT
TCAGCGACGCGGATGCATACCACCTGGACCAGGCCTTTCCGCTGCTGATGAAACAACTGGAACTCATGCTCACCAGCGGT
GAACTGAATCCCCGCCATCAGCATACCATCACACTGTATGCGAAAGGGCTGACCTGCGAAGCCGATACCCTTGGCAGTTG
TGGTTACGTTTATCTGGCTGTTTATCCGACACCGGCAGCGCCCGCAATCACCGTATAA

Protein sequence :
MSDTLPGTTHPDDNHDRPWWGLPCTVTPCFGARLVQEGNRLHYLADRAGIRGRFSDADAYHLDQAFPLLMKQLELMLTSG
ELNPRHQHTITLYAKGLTCEADTLGSCGYVYLAVYPTPAAPAITV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeU YP_854324.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-55 99
yeeU AAZ04460.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-55 99
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 6e-54 96
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 6e-54 96
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 1e-53 96
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 6e-52 95
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 6e-52 95
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 2e-50 95
c5150 NP_756998.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-51 95
yeeU CAE85203.1 YeeU protein Not tested PAI V 536 Protein 8e-52 94
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 2e-50 93
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 6e-49 92
unnamed CAI43903.1 hypothetical protein Not tested LEE Protein 5e-49 92
Z1220 NP_286755.1 structural protein Not tested TAI Protein 1e-50 91
Z1658 NP_287161.1 structural protein Not tested TAI Protein 1e-50 91
unnamed AAL57576.1 unknown Not tested LEE Protein 9e-49 90
unnamed AAL08477.1 unknown Not tested SRL Protein 2e-50 88
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 1e-48 86
unnamed AAL67343.1 intergenic-region protein Not tested PAI II CFT073 Protein 6e-49 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yeeU YP_002392923.1 antitoxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage VFG0662 Protein 2e-54 96
yeeU YP_002392923.1 antitoxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage VFG1619 Protein 3e-52 95
yeeU YP_002392923.1 antitoxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage VFG1681 Protein 2e-49 92
yeeU YP_002392923.1 antitoxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage VFG1068 Protein 9e-51 88