Gene Information

Name : ECS88_3311 (ECS88_3311)
Accession : YP_002392920.1
Strain : Escherichia coli S88
Genome accession: NC_011742
Putative virulence/resistance : Virulence
Product : antirestriction protein (klcA-like)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3270133 - 3270618 bp
Length : 486 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 7519596; Product type pf : factor

DNA sequence :
ATGAAAACTGTTTCTCAGAACACCTGTACACTTTCTGCTTCCGTAGTCACAGCTTCAGAGAATGACCAGCCTCAACTGGT
TGCCACTCTCGTTCCTCATGAACAGCGCATCAGCTTCTGGCCGCAGCATTTTGGCCTCATTCCACAGTGGGTGACCCTGG
AACCCCGTGTCTTCGGCTGGATGGACCATCTTTGCGAAGACTACTGCGGTGGTATCTGGAATCTGTACACCCTGAACAAC
GGCGGGGCATTTATGGCACCCGAACCGGATGACGATGATGACGAGACATGGGTACTGTTCAATGCCATGAACGGTAACCG
TGCTGAAATGAGCCCGGAAGCCGCCGGCATTGCTGCCTGTCTGATGACGTACAGTCATCATGCCTGTCGCACGGAGTGTT
ATGCCATGACGGTTCATTATTACCGTCTGCGGGACTACGCCCTGCAGCATCCGGAATGCAACGCCATTATGCGCATCATT
GACTGA

Protein sequence :
MKTVSQNTCTLSASVVTASENDQPQLVATLVPHEQRISFWPQHFGLIPQWVTLEPRVFGWMDHLCEDYCGGIWNLYTLNN
GGAFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECNAIMRII
D

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-72 100
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-72 100
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-72 100
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 8e-62 92
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 8e-62 92
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 2e-59 91
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 2e-59 91
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 1e-61 91
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 7e-66 90
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 1e-66 90
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 2e-67 90
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 8e-59 89
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 4e-60 89
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 3e-65 89
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 6e-59 88
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 2e-64 87
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 7e-65 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECS88_3311 YP_002392920.1 antirestriction protein (klcA-like) VFG0659 Protein 7e-60 91
ECS88_3311 YP_002392920.1 antirestriction protein (klcA-like) VFG1677 Protein 3e-66 90
ECS88_3311 YP_002392920.1 antirestriction protein (klcA-like) VFG1527 Protein 3e-65 87
ECS88_3311 YP_002392920.1 antirestriction protein (klcA-like) VFG1616 Protein 7e-65 87