|
Name : ECS88_3309 (ECS88_3309) Accession : YP_002392919.1 Strain : Escherichia coli S88 Genome accession: NC_011742 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 3269224 - 3270042 bp Length : 819 bp Strand : + Note : Evidence 4 : Homologs of previously reported genes of unknown function DNA sequence : ATGCAATTAGCCAGTCGTTTTGGTCATGTAAATCAGATACGCCGTGATCGTCCCTTAACTCGTGAAGAACTGATGCAGGT CGTCCCCAGCGTATTCGGGGAAGATAAGCACACATCCAGAAGCGAGAACTATACCTGGATCCCCACCATCACAGTGCTGG AAAGCCTGCAGCGGGAAGGTTTTCAGCCATTCTTCGCCTGCCAGACCCGTGTGCGCGACCCGGGCCGCCGGGGATACACC AAACACATGCTGCGTCTGCGCCGTGACGGGGAGATAAACGGACAACATGTCCCTGAAATCATCCTGCTGAACTCCCATGA CGGTACCTCCAGCTACCAGATGCTGCCGGGTTACTTCAGGTTCGTCTGCCAGAACGGATGCGTCTGTGGTCAGTCTCTGG GGGAAGTGCGTGTTCCACACCGGGGAAATGTAGTGGAGAAAGTTATCGAAGGGGCTTACGAGGTGGTGGGGGTTTTTGAC CGGATTGAAGAAAAGCGTGACGCCATGCAGTCGCTGGTCCTGCCGCCACCGGCACGCCAGGCGCTGGCACAGGCGGCACT GACTTACCGTTATGGTGACGAACATCAGCCCGTCACCACCGCCGACATTCTGACGCCGCGACGCCGGGAGGATTACGGTA AGGACCTGTGGAGCGCATATCAGACCATCCAGGAGAATATGCTGAAAGGCGGGATTTCCGGTCGCAGCGCTAAAGGAAAA CGTATCCACACCCGTGCCATTCACAGCATCGACACGGACATTAAGCTCAATCGCGCATTGTGGGTAATGACAGAAACGCT GCTGGAGAACATGCGCTGA Protein sequence : MQLASRFGHVNQIRRDRPLTREELMQVVPSVFGEDKHTSRSENYTWIPTITVLESLQREGFQPFFACQTRVRDPGRRGYT KHMLRLRRDGEINGQHVPEIILLNSHDGTSSYQMLPGYFRFVCQNGCVCGQSLGEVRVPHRGNVVEKVIEGAYEVVGVFD RIEEKRDAMQSLVLPPPARQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSAKGK RIHTRAIHSIDTDIKLNRALWVMTETLLENMR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| yafZ | YP_854321.1 | hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 8e-121 | 100 |
| ORF_47 | AAZ04456.1 | conserved hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 6e-121 | 100 |
| c5156 | NP_757004.1 | hypothetical protein | Not tested | PAI II CFT073 | Protein | 9e-121 | 99 |
| SF2994 | NP_708768.1 | hypothetical protein | Not tested | SHI-1 | Protein | 3e-115 | 94 |
| unnamed | CAI43843.1 | hypothetical protein | Not tested | LEE | Protein | 7e-115 | 94 |
| aec71 | AAW51754.1 | Aec71 | Not tested | AGI-3 | Protein | 7e-115 | 94 |
| yafZ | ADD91704.1 | YafZ | Not tested | PAI-I AL862 | Protein | 7e-115 | 94 |
| S3199 | NP_838482.1 | hypothetical protein | Not tested | SHI-1 | Protein | 3e-115 | 94 |
| unnamed | CAD66201.1 | hypothetical protein | Not tested | PAI III 536 | Protein | 2e-113 | 93 |
| ECO103_3587 | YP_003223444.1 | hypothetical protein | Not tested | LEE | Protein | 2e-113 | 92 |
| z1215 | CAD33785.1 | Z1215 protein | Not tested | PAI I 536 | Protein | 9e-111 | 91 |
| unnamed | CAD42096.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 3e-109 | 90 |
| Z1215 | NP_286750.1 | hypothetical protein | Not tested | TAI | Protein | 5e-109 | 89 |
| Z1655 | NP_287158.1 | hypothetical protein | Not tested | TAI | Protein | 5e-109 | 89 |
| yafZ | CAE85199.1 | YafZ protein | Not tested | PAI V 536 | Protein | 2e-109 | 89 |
| ORF SG86 | AAN62307.1 | conserved hypothetical protein | Not tested | PAGI-3(SG) | Protein | 1e-71 | 55 |
| ORF C80 | AAN62174.1 | conserved hypothetical protein; associated with oriT region on plasmids | Not tested | PAGI-2(C) | Protein | 2e-70 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECS88_3309 | YP_002392919.1 | hypothetical protein | VFG0658 | Protein | 1e-115 | 94 |
| ECS88_3309 | YP_002392919.1 | hypothetical protein | VFG1676 | Protein | 1e-113 | 93 |
| ECS88_3309 | YP_002392919.1 | hypothetical protein | VFG1526 | Protein | 5e-111 | 91 |
| ECS88_3309 | YP_002392919.1 | hypothetical protein | VFG1615 | Protein | 2e-109 | 90 |
