Gene Information

Name : ECS88_3308 (ECS88_3308)
Accession : YP_002392918.1
Strain : Escherichia coli S88
Genome accession: NC_011742
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3268901 - 3269134 bp
Length : 234 bp
Strand : +
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
ATGTCGGACTGCCACCCTGTTTTATTGCCCGAAGGCCCTTTCTCACGCGAACAGGCGGTTGCCGTCACAACAGCTTACCG
CAATGTGCTTATTGAGGATGACCAGGGAACGCATTTCCGGCTGGTTATCCGCAATGCCGAAGGGCAGCTACGCTGGCGGT
GCTGGAATTTTGAACCTGATGCCGGAAAACAGCTAAATTCGTATCTCGCCAGTGAGGGAATTCTCAGGCAATAA

Protein sequence :
MSDCHPVLLPEGPFSREQAVAVTTAYRNVLIEDDQGTHFRLVIRNAEGQLRWRCWNFEPDAGKQLNSYLASEGILRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33784.1 hypothetical protein Not tested PAI I 536 Protein 8e-32 100
ORF_46 AAZ04455.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 8e-32 100
c5157 NP_757005.1 hypothetical protein Not tested PAI II CFT073 Protein 8e-31 97
ykfF CAE85198.1 YkfF protein Not tested PAI V 536 Protein 5e-28 89
ykfF ADD91705.1 YkfF Not tested PAI-I AL862 Protein 9e-18 68
unnamed CAI43842.1 hypothetical protein Not tested LEE Protein 9e-18 68
aec70 AAW51753.1 Aec70 Not tested AGI-3 Protein 9e-18 68
unnamed AAL67351.1 intergenic-region protein Not tested PAI II CFT073 Protein 8e-13 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECS88_3308 YP_002392918.1 hypothetical protein VFG1525 Protein 3e-32 100