Gene Information

Name : ECS88_3304 (ECS88_3304)
Accession : YP_002392915.1
Strain : Escherichia coli S88
Genome accession: NC_011742
Putative virulence/resistance : Virulence
Product : GTP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3596
EC number : -
Position : 3266303 - 3267187 bp
Length : 885 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : enzyme

DNA sequence : 
ATGTCATTCAGCCATTCTTCCCTCTCCGCACAAGTGAAATCATATCTGACGTTTCTTCCTGAAGAAATTCGCCAGAAAAT
CCTTGAACATCTCCACAGTGTTATTCATTACGAGCCCGTGATTGGCATTATGGGTAAATCCGGCACCGGCAAAAGCAGCC
TGTGTAATGCCATTTTTCAGTCCCGTATCTGCGCCACGCATCCCCTGAACGGCTGCACCCGCCAGGCTCATCGTCTTACC
CTGCAACTCGGTGAACGCAGAATGACGCTGGTCGATCTGCCCGGCATTGGTGAAACACCGCAGCATGATCAGGAATACCG
GACACTTTATCGTCAGCTGCTACCGGAACTGGATCTGATTATCTGGATCCTGCGGGCAGATGAACGCGCGTATGCCGCCG
ACATTACCATGCATCAGTTTTTACTGAATGAAGGCGCAGATCCCTCGCGTTTTCTGTTTGTTCTCAGCCATGCCGATCGC
GTGTTTCCTGCTGAAGAATGGAATGCCACAGAAAAATGCCCGTCCCGTCAGCAGGCGCTCTCACTGGCGACGGTGACAGC
CCGGGTGGCAACCCTGTTCCCTTCATCATTTCCAGTACTCTCCGTTGCTGCACCTGTCGGCTGGAACCTTCCGGCGTTTG
TGTCGCTGATGATCCACGCACTGCCACCACAGGCAACCAGCGCGGTGTATTCACATATCCGGGGAGAAAACCGCTCTGAA
CAGGCCCGGAAACACGCACAACAGACTTTTGGTGAAACCATCGGGAAAAGTTTTGACGACGCCGTTGCCCGTTTCAGTTT
TCCGGCCTGGATGTTACAGCTTCTGCGCAAAACCCGGGACCGCATTATCCACCTGCTGATCACACTGTGGGAGCGTCTGT
TCTGA

Protein sequence : 
MSFSHSSLSAQVKSYLTFLPEEIRQKILEHLHSVIHYEPVIGIMGKSGTGKSSLCNAIFQSRICATHPLNGCTRQAHRLT
LQLGERRMTLVDLPGIGETPQHDQEYRTLYRQLLPELDLIIWILRADERAYAADITMHQFLLNEGADPSRFLFVLSHADR
VFPAEEWNATEKCPSRQQALSLATVTARVATLFPSSFPVLSVAAPVGWNLPAFVSLMIHALPPQATSAVYSHIRGENRSE
QARKHAQQTFGETIGKSFDDAVARFSFPAWMLQLLRKTRDRIIHLLITLWERLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67395.1 unknown Not tested PAI II CFT073 Protein 4e-138 100
ORF_43 AAZ04452.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 4e-138 100
APECO1_3493 YP_854318.1 hypothetical protein Not tested PAI I APEC-O1 Protein 6e-138 100
c5162 NP_757010.1 hypothetical protein Not tested PAI II CFT073 Protein 6e-138 100
unnamed CAD42093.1 hypothetical protein Not tested PAI II 536 Protein 5e-134 95
unnamed CAD33781.1 hypothetical protein Not tested PAI I 536 Protein 2e-135 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECS88_3304 YP_002392915.1 GTP-binding protein VFG1522 Protein 1e-135 95
ECS88_3304 YP_002392915.1 GTP-binding protein VFG1612 Protein 3e-134 95