Gene Information

Name : papK (ECS88_3260)
Accession : YP_002392879.1
Strain : Escherichia coli S88
Genome accession: NC_011742
Putative virulence/resistance : Virulence
Product : Fimbrial adapter PapK precursor
Function : -
COG functional category : N : Cell motility
COG ID : COG3539
EC number : -
Position : 3232955 - 3233494 bp
Length : 540 bp
Strand : -
Note : Evidence 1b : Function experimentally demonstrated in the studied species; PubMedId : 1357526, 8096174, 10049807, 10446050; Product type s : structure

DNA sequence :
GTGATGATAAAAAGCACAGGCGCTCTTTTACTGTTTGCCGCACTGTCTGCCGGACAGGCAATAGCCTCAGATGTGGCATT
CAGGGGTAATCTGCTTGACAGACCTTGCCATGTGTCCGGTGACAGTCTGAATAAACATGTCGTCTTCAAAACCCGGGCGT
CCAGGGATTTCTGGTATCCGCCCGGACGTTCGCCGACAGAGTCGTTTGTCATCAGGCTGGAAAACTGCCATGCAACAGCA
GTTGGCAAAATTGTGACCCTGACCTTTAAGGGAACGGAAGAGGCGGCCCTCCCGGGCCATCTGAAGGTAACCGGAGTGAA
TGCCGGCCGGTTAGGCATTGCACTGCTGGACACCGATGGCAGCAGTCTGCTGAAACCCGGCGCTTCCCATAACAAAGACC
AGGGGGAAAAGGTTACCGGAAACAGTCTTGAGCTTCCTTTCGGCGCGTATGTTGTGGCAACGCCGGAAGCCCTGCGGACG
AAGAGTGTGGTACCCGGTGATTATGAAGCAACAGCCACGTTTGAATTGACATATCGTTAG

Protein sequence :
MMIKSTGALLLFAALSAGQAIASDVAFRGNLLDRPCHVSGDSLNKHVVFKTRASRDFWYPPGRSPTESFVIRLENCHATA
VGKIVTLTFKGTEEAALPGHLKVTGVNAGRLGIALLDTDGSSLLKPGASHNKDQGEKVTGNSLELPFGAYVVATPEALRT
KSVVPGDYEATATFELTYR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papK AAZ04421.1 P pilus protein Virulence PAI I APEC-O1 Protein 4e-74 100
papK YP_854251.1 pilus assembly protein PapK Virulence PAI I APEC-O1 Protein 6e-74 100
prfK CAD42026.1 PrfK protein Virulence PAI II 536 Protein 2e-73 99
papK AAL67411.1 PapK Virulence PAI II CFT073 Protein 1e-73 99
papK NP_755461.1 PapK protein Virulence PAI I CFT073 Protein 3e-74 99
papK_2 NP_757030.1 PapK protein Virulence PAI II CFT073 Protein 3e-74 99
papK YP_002414012.1 Fimbrial adapter PapK Not tested Not named Protein 3e-74 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
papK YP_002392879.1 Fimbrial adapter PapK precursor VFG1545 Protein 9e-74 99
papK YP_002392879.1 Fimbrial adapter PapK precursor VFG0898 Protein 1e-74 99
papK YP_002392879.1 Fimbrial adapter PapK precursor VFG0887 Protein 1e-74 99