Gene Information

Name : papE (ECS88_3259)
Accession : YP_002392878.1
Strain : Escherichia coli S88
Genome accession: NC_011742
Putative virulence/resistance : Virulence
Product : Fimbrial tip protein PapE
Function : -
COG functional category : N : Cell motility
COG ID : COG3539
EC number : -
Position : 3232407 - 3232946 bp
Length : 540 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 2869489, 2895103, 1357526, 10049807; Product type s : structure

DNA sequence : 
TTGTACAGGATATTTCAGATGAAAAAGATAAGAGGTTTGTGTCTTCCGGTAATGCTGGGGGCAGTGTTAATGTCTCAGCA
TGTACATGCAGTTGATAATCTGACCTTCAGAGGAAAACTGATTATTCCTGCCTGTACTGTAAGCAACACAACTGTTGACT
GGCAGGATGTAGAGATTCAGACCCTGAGTCAAAATGGAAATCACGAAAAAGAGTTTACTGTGAATATGCGGTGTCCCTAT
AATCTGGGAACAATGAAGGTTACGATAACGGCAACAAACACTTATAACAATGCTATTTTAGTTCAGAATACATCAAACAC
ATCTTCTGATGGGTTACTCGTTTATCTTTATAACAGTAATGCAGGAAATATTGGGACTGCGATAACTTTAGGGACTCCAT
TTACGCCCGGAAAAATCACAGGTAATAATGCAGATAAAACTATATCACTTCATGCCAAACTTGGATATAAAGGGAATATG
CAGAATTTGATAGCCGGTCCTTTCTCTGCAACAGCAACGCTGGTTGCATCATATTCGTAA

Protein sequence : 
MYRIFQMKKIRGLCLPVMLGAVLMSQHVHAVDNLTFRGKLIIPACTVSNTTVDWQDVEIQTLSQNGNHEKEFTVNMRCPY
NLGTMKVTITATNTYNNAILVQNTSNTSSDGLLVYLYNSNAGNIGTAITLGTPFTPGKITGNNADKTISLHAKLGYKGNM
QNLIAGPFSATATLVASYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papE YP_854250.1 PapE protein Virulence PAI I APEC-O1 Protein 9e-71 100
papE AAZ04420.1 P pilus tip protein Virulence PAI I APEC-O1 Protein 6e-71 100
papE_2 NP_757029.1 PapE protein Virulence PAI II CFT073 Protein 2e-69 92
papE NP_755460.1 PapE protein Virulence PAI I CFT073 Protein 2e-69 92
prfE CAD42025.1 PrfE protein Virulence PAI II 536 Protein 7e-59 73
prsE YP_002414011.1 Fimbrial protein Not tested Not named Protein 2e-55 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
papE YP_002392878.1 Fimbrial tip protein PapE VFG0899 Protein 6e-70 92
papE YP_002392878.1 Fimbrial tip protein PapE VFG0888 Protein 6e-70 92
papE YP_002392878.1 Fimbrial tip protein PapE VFG1544 Protein 3e-59 73