Gene Information

Name : J (ECS88_2819)
Accession : YP_002392464.1
Strain : Escherichia coli S88
Genome accession: NC_011742
Putative virulence/resistance : Unknown
Product : Baseplate assembly protein J (GpJ)
Function : -
COG functional category : R : General function prediction only
COG ID : COG3948
EC number : -
Position : 2808998 - 2809945 bp
Length : 948 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type h : extrachromosomal origin

DNA sequence :
GTGTACCTGTGTCCCTTTCCGTATCAACAGGAGCAGAGAATGGCAGTGATTGACCTTTCGCAGTTGCCTGCACCGCAGAT
TGTGGATGTGCCGGACTTTGAGACGCTGCTTGCCGAACGCAAGGCAGAATTTGTGGCGCTTCATCCGAAAGATGAGCAGG
AAGCAGTGATCCGCACGCTGGAACTGGAATCTGAACCCGTCACCAAATTGTTGCAGGAGAACGCTTATCGTGAGTTGCTT
CTGCGCCAGCGCATTAACGAAGCCGCGCAGGCGGTGATGGCGGCTTATGCCATAGGGAGCGATCTGGACCAGCTCGCTGC
CAATTACAACGTGAAACGCCTGACGGTGACGCCTGCTGATAATGACGCTGTGCCGCCCGTTGCGGCAGTGATGGAAAGTG
ATGAAGCGTTACGCCTGCGTGTGCCTGCAGCCTTTGAAGGGCTTTCAGTTGCGGGGCCAACTGCAGCTTATGAATTTCAT
GCCCGAAGCGCCGACGGTCGGGTGGCGGATGCCAGTGCAACCAGCCCGGCACCTGCAGAGGTGGTGCTGACTGTCCTTAG
CCGCGAAGGCGACGGAACAGCAGAAAAAGACCTGCTGGATGTGGTGGAGAAAGCCCTGAACAGTGAGAACGTCCGCCCGG
TGGCTGACCGTCTTACGGTTCGCAGCGCAGAAATCATCCCGTACCGCGTGGAAGCCACCATTTTTCTCTATCCGGGGCCC
GAAGCAGAGCCGGTAATGGCAGCGGCAAAAGCCAGCCTGCAGAAGTACATCGCCAGTCAGACGCGGCTTGGTCGGGATAT
TCGCCGTAGTGCCATTTTTGCCGCGCTGCATGTTGAGGGGGTTCAACGTGTGGAGCTGGCTTCACCGCTGGCTGATGTGG
TCCTGAACAAAACACAGGCCGCATCATGTACGCAGTGGAGCGTAACCAACGGAGGAACGGATGAATAG

Protein sequence :
MYLCPFPYQQEQRMAVIDLSQLPAPQIVDVPDFETLLAERKAEFVALHPKDEQEAVIRTLELESEPVTKLLQENAYRELL
LRQRINEAAQAVMAAYAIGSDLDQLAANYNVKRLTVTPADNDAVPPVAAVMESDEALRLRVPAAFEGLSVAGPTAAYEFH
ARSADGRVADASATSPAPAEVVLTVLSREGDGTAEKDLLDVVEKALNSENVRPVADRLTVRSAEIIPYRVEATIFLYPGP
EAEPVMAAAKASLQKYIASQTRLGRDIRRSAIFAALHVEGVQRVELASPLADVVLNKTQAASCTQWSVTNGGTDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4613 NP_458695.1 probable phage baseplate assembly protein Not tested SPI-7 Protein 2e-118 93
t4307 NP_807903.1 phage baseplate assembly protein Not tested SPI-7 Protein 2e-118 93
unnamed ABR13480.1 predicted baseplate or tail fiber base Not tested PAGI-6 Protein 2e-58 56