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Name : yfcS (ECS88_2484) Accession : YP_002392162.1 Strain : Escherichia coli S88 Genome accession: NC_011742 Putative virulence/resistance : Virulence Product : periplasmic pilus exported chaperone Function : - COG functional category : N : Cell motility COG ID : COG3121 EC number : - Position : 2480076 - 2480969 bp Length : 894 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf : factor DNA sequence : GTGAACAAAAGGGAACGGCAGCCCCTGATTCTTCAGCGCCAGAAATTAAGCCTGTTATTCAGGACCAGACGCGGCAAGTC ACACCAACGGAAGCGCCGACGTCAATTTCAGCAACTCAATAATCTGATTAAGGAACGATCAATGTCTTATAAATTATCCT GTCCAATGCTCGTCAGCACAGCGCTGATGGCACTGCTTACCACCGCCAGCCTGACGGCGCATGCATCGGTCACCCCGGAT CGCACCCGTCTGGTGTTTAACGAAAGCGATAAATCGATCAGCGTGACGTTGCGTAACAACACCGAAAAGCTGCCTTACCT GGCGCAAAGCTGGCTGGAAGACGAGAAGGGCAACAAAATCACTTCGCCGCTGGCGGTGCTGCCGCCTGTGCAGCGTATTG ACGCTATGATGAACGGCCAGGTGAAGATTCAGGCGCTGCCGGACATTCACACGCTGCCGTCCGACCGAGAAAGCCTGTTC TACTACAACGTGCGTGAGATCCCGCCAAAGTCCGGGAAAGCCAACACCCTGCAAATTGCGCTGCAAACGCGCATCAAGCT GTTCTGGCGACCAAAGGCGCTGGAGAAGATTGACATGAGAAGACCGTGGCAGTTTAAGGTCACACTCACGCGCAGTGGCC AGGACTATACCGTCAATAACCCGACGCCGTACCACGTCATCATCAGCGATGCCAGCACACAGAAGAAAGGGCTGACTGCC GCCGGGTTTAAACCGCTGGTGATGCCACCGAAAACGTCACAACCGTTAAAGGCAAAAATGGCGAGCGCCCCGGTGCTGAC CTATATCAATGACTACGGCGCGCGCATGCCGCTGATCTTCCGTTGTGAAGGGAACACCTGCAAGGTGGATGAAGATCAAA GCAGCAAAGGTTGA Protein sequence : MNKRERQPLILQRQKLSLLFRTRRGKSHQRKRRRQFQQLNNLIKERSMSYKLSCPMLVSTALMALLTTASLTAHASVTPD RTRLVFNESDKSISVTLRNNTEKLPYLAQSWLEDEKGNKITSPLAVLPPVQRIDAMMNGQVKIQALPDIHTLPSDRESLF YYNVREIPPKSGKANTLQIALQTRIKLFWRPKALEKIDMRRPWQFKVTLTRSGQDYTVNNPTPYHVIISDASTQKKGLTA AGFKPLVMPPKTSQPLKAKMASAPVLTYINDYGARMPLIFRCEGNTCKVDEDQSSKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 5e-47 | 46 |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 6e-47 | 45 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 3e-46 | 45 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 3e-46 | 45 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 2e-46 | 45 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 2e-46 | 45 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 2e-46 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yfcS | YP_002392162.1 | periplasmic pilus exported chaperone | VFG1547 | Protein | 4e-47 | 45 |
| yfcS | YP_002392162.1 | periplasmic pilus exported chaperone | VFG0896 | Protein | 1e-46 | 45 |
