Gene Information

Name : GpU (ECS88_2187)
Accession : YP_002391881.1
Strain : Escherichia coli S88
Genome accession: NC_011742
Putative virulence/resistance : Unknown
Product : tail assembly protein (GpU)
Function : -
COG functional category : R : General function prediction only
COG ID : COG3499
EC number : -
Position : 2170739 - 2171218 bp
Length : 480 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 12426340; Product type h : extrachromosomal origin

DNA sequence :
ATGATGCTCGCGTTAGGTATGTTTGTTTTTATGCGCCAGACGCTGCCACACCAGACCATGCAGCGTGAATCAGATTATCG
CTGGCCGTCAAATTCCCGTATCGGCAAACGGGATGCCTACCAGTTTCTCGGTGTGGGTGAGGAAAACATTACGCTTGCCG
GTGTGCTTTATCCAGAACTGACCGGCGGAAAGCTGACGATGACCACGCTCAGACTGATGGCAGAGGAAGGCCGGGCGTGG
CCGTTGCTGGATGGCACCGGCATGATTTACGGCATGTATGTCATCAGCAGGGTGAGTGAAACAGGGAGTATTTTCTTTGC
AGACGGCACACCCCGAAAAATTGATTTTACGCTGTCGCTCACCCGCGTTGATGAATCACTGGCCGCGCTTTATGGCGATA
TCGGTAAACAGGCGGAATCGCTCATCGGTAAGGCTGGCAGTATGGCGACTAAATTCACGGGTATGACGGGGGCGGGATAA

Protein sequence :
MMLALGMFVFMRQTLPHQTMQRESDYRWPSNSRIGKRDAYQFLGVGEENITLAGVLYPELTGGKLTMTTLRLMAEEGRAW
PLLDGTGMIYGMYVISRVSETGSIFFADGTPRKIDFTLSLTRVDESLAALYGDIGKQAESLIGKAGSMATKFTGMTGAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13489.1 phage-related tail protein Not tested PAGI-6 Protein 2e-34 52
STY4602 NP_458685.1 putative phage tail protein Not tested SPI-7 Protein 3e-34 45
t4296 NP_807893.1 phage tail protein Not tested SPI-7 Protein 3e-34 45